RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PCDHGB7Q9Y5F8 929 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 FADS3Q9Y5Q0 445 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 NFAT5O94916 1531 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ZFYVE16Q7Z3T8 1539 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 PDS5AQ29RF7 1337 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 PNPLA7Q6ZV29 1317 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 MROH2AA6NES4 1674 aa5.21□□□□□ -1.57
SF3B1-207ENST00000468925 DLG5Q8TDM6 1919 aa5.21□□□□□ -1.57
SF3B1-207ENST00000468925 NEO1Q92859 1461 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PNMA6EA0A0J9YXQ4 647 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 A8MXQ7 604 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SPECC1L-ADORA2AF8WAN1 911 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 FOXP2O15409 715 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 DHX15O43143 795 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PJA2O43164 708 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SNX3O60493 162 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 MGEA5O60502 916 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 JAK2O60674 1132 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 DCTN3O75935 186 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 UNC5CO95185 931 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 MED26O95402 600 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 LCA5LO95447 670 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 GJB6O95452 261 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 IGLV1-40P01703 118 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PDGFRBP09619 1106 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 NUDT17P0C025 328 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 TPBGLP0DKB5 382 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PIM1P11309 404 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 MPSTP25325 297 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 TMOD1P28289 359 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 HNRNPH3P31942 346 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 IL13P35225 146 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 LIFRP42702 1097 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 MMP13P45452 471 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 CACNA2D1P54289 1103 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 RAD23BP54727 409 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 INHBCP55103 352 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 HDAC4P56524 1084 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 NCALDP61601 193 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 ERVK-24P63145 666 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 RACK1P63244 317 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 GPSM2P81274 684 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 EXOSC10Q01780 885 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 NEXNQ0ZGT2 675 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SERINC3Q13530 473 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 DCTN2Q13561 401 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 DSC3Q14574 896 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 MTF1Q14872 753 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 R3HDM1Q15032 1099 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 TTF1Q15361 905 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SAFBQ15424 915 aaKnown RBP eCLIP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PKN1Q16512 942 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 RILPL1Q5EBL4 403 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 C10orf76Q5T2E6 689 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SYCP2LQ5T4T6 812 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 KCTD16Q68DU8 428 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 Q6ZS46 218 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 WAPLQ7Z5K2 1190 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 CATIPQ7Z7H3 387 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 DZIP1Q86YF9 867 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 NELFCDQ8IXH7 590 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 KIRREL3Q8IZU9 778 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 TTC16Q8NEE8 873 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 LINS1Q8NG48 757 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 GATA6Q92908 595 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 ATP6V0A1Q93050 837 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 EFHD2Q96C19 240 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 DGCR14Q96DF8 476 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 CDK5RAP3Q96JB5 506 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SNX27Q96L92 541 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 DHRS1Q96LJ7 313 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 NOX5Q96PH1 765 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 UIMC1Q96RL1 719 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 HNRNPABQ99729 332 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SYT15Q9BQS2 421 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 YIPF2Q9BWQ6 316 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PUS3Q9BZE2 481 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 ROPN1BQ9BZX4 212 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 LRMDAQ9H2I8 198 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 TAOK3Q9H2K8 898 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SLITRK6Q9H5Y7 841 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 C7orf69Q9H7B7 122 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 ROPN1Q9HAT0 212 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PREBQ9HCU5 417 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SEC31BQ9NQW1 1179 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 SAMSN1Q9NSI8 373 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 TYW1Q9NV66 732 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 USP40Q9NVE5 1235 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PLK2Q9NYY3 685 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 BTBD7Q9P203 1132 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 ANGPTL2Q9UKU9 493 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PNMA2Q9UL42 364 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PPP1R9AQ9ULJ8 1098 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 TTC7AQ9ULT0 858 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 DIS3Q9Y2L1 958 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 NOC2LQ9Y3T9 749 aaKnown RBP5.21□□□□□ -1.58
SF3B1-207ENST00000468925 ATP6V0A2Q9Y487 856 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 RNF114Q9Y508 228 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 ARHGAP5Q13017 1502 aa5.21□□□□□ -1.58
SF3B1-207ENST00000468925 PASKQ96RG2 1323 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms