RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 NDST4Q9H3R1 872 aa19.05■□□□□ 0.64
RPL39-202ENST00000468844 CPSF3Q9UKF6 684 aaKnown RBP19.05■□□□□ 0.64
RPL39-202ENST00000468844 LGALS16A8MUM7 142 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 PES1O00541 588 aaKnown RBP19.04■□□□□ 0.64
RPL39-202ENST00000468844 GPR182O15218 404 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 CBFA2T2O43439 604 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 TRIM49P0CI25 452 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 TRIM49CP0CI26 452 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 WNT7BP56706 349 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 MCCD1P59942 119 aaPredicted RBP19.04■□□□□ 0.64
RPL39-202ENST00000468844 OSTNP61366 133 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 PAK2Q13177 524 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 FILIP1LQ4L180 1135 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 ERVK-5Q9HDB9 667 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 RBAKQ9NYW8 714 aaPredicted RBP19.04■□□□□ 0.64
RPL39-202ENST00000468844 NPTXRO95502 500 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 KCNH2Q12809 1159 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 C1orf220Q5T0J3 134 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 USP38Q8NB14 1042 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 PARD3BQ8TEW8 1205 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 TBX21Q9UL17 535 aa19.04■□□□□ 0.64
RPL39-202ENST00000468844 TTC3P53804 2025 aa19.03■□□□□ 0.64
RPL39-202ENST00000468844 KRT13P13646 458 aa19.03■□□□□ 0.64
RPL39-202ENST00000468844 RANBP2P49792 3224 aaKnown RBP19.03■□□□□ 0.64
RPL39-202ENST00000468844 VAMP7P51809 220 aa19.03■□□□□ 0.64
RPL39-202ENST00000468844 DCAF4L1Q3SXM0 396 aa19.03■□□□□ 0.64
RPL39-202ENST00000468844 UBXN11Q5T124 520 aa19.03■□□□□ 0.64
RPL39-202ENST00000468844 BRSK2Q8IWQ3 736 aa19.03■□□□□ 0.64
RPL39-202ENST00000468844 ANP32BQ92688 251 aaKnown RBP19.03■□□□□ 0.64
RPL39-202ENST00000468844 HIPK3Q9H422 1215 aa19.03■□□□□ 0.64
RPL39-202ENST00000468844 TPM3P06753 285 aa19.02■□□□□ 0.64
RPL39-202ENST00000468844 TPM2P07951 284 aa19.02■□□□□ 0.64
RPL39-202ENST00000468844 UBXN1Q04323 297 aa19.02■□□□□ 0.64
RPL39-202ENST00000468844 PPP2R3AQ06190 1150 aa19.02■□□□□ 0.64
RPL39-202ENST00000468844 GPNMBQ14956 572 aa19.02■□□□□ 0.64
RPL39-202ENST00000468844 ENOX2Q16206 610 aaKnown RBP19.02■□□□□ 0.64
RPL39-202ENST00000468844 TWF2Q6IBS0 349 aaKnown RBP19.02■□□□□ 0.64
RPL39-202ENST00000468844 CCDC127Q96BQ5 260 aa19.02■□□□□ 0.64
RPL39-202ENST00000468844 TMX1Q9H3N1 280 aa19.02■□□□□ 0.64
RPL39-202ENST00000468844 SCN1AP35498 2009 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 LRRIQ3A6PVS8 624 aaPredicted RBP19.02■□□□□ 0.63
RPL39-202ENST00000468844 NBNO60934 754 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 CLTBP09497 229 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 STAG3L1P0CL83 205 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 PBX1P40424 430 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 CCDC51Q96ER9 411 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 PDLIM2Q96JY6 352 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 POP1Q99575 1024 aaKnown RBP19.02■□□□□ 0.63
RPL39-202ENST00000468844 IFIH1Q9BYX4 1025 aaKnown RBP19.02■□□□□ 0.63
RPL39-202ENST00000468844 PPP1R12CQ9BZL4 782 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 TRIM6Q9C030 488 aaPredicted RBP19.02■□□□□ 0.63
RPL39-202ENST00000468844 WNT8AQ9H1J5 351 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 PDE11AQ9HCR9 933 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 CHST12Q9NRB3 414 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 HES2Q9Y543 173 aa19.02■□□□□ 0.63
RPL39-202ENST00000468844 MEFVO15553 781 aaPredicted RBP19.01■□□□□ 0.63
RPL39-202ENST00000468844 MGEA5O60502 916 aa19.01■□□□□ 0.63
RPL39-202ENST00000468844 AFPP02771 609 aaKnown RBP19.01■□□□□ 0.63
RPL39-202ENST00000468844 CXCL8P10145 99 aa19.01■□□□□ 0.63
RPL39-202ENST00000468844 DLATP10515 647 aaKnown RBP19.01■□□□□ 0.63
RPL39-202ENST00000468844 PSMD6Q15008 389 aa19.01■□□□□ 0.63
RPL39-202ENST00000468844 SCLYQ96I15 445 aa19.01■□□□□ 0.63
RPL39-202ENST00000468844 NXF3Q9H4D5 531 aaKnown RBP19.01■□□□□ 0.63
RPL39-202ENST00000468844 RRAGDQ9NQL2 400 aaPredicted RBP19.01■□□□□ 0.63
RPL39-202ENST00000468844 LTBP2Q14767 1821 aa19.01■□□□□ 0.63
RPL39-202ENST00000468844 PTPRJQ12913 1337 aa19.01■□□□□ 0.63
RPL39-202ENST00000468844 GRM5P41594 1212 aa19■□□□□ 0.63
RPL39-202ENST00000468844 PPP3CAQ08209 521 aa19■□□□□ 0.63
RPL39-202ENST00000468844 HSP90AA2PQ14568 343 aaPredicted RBP19■□□□□ 0.63
RPL39-202ENST00000468844 CBWD6Q4V339 395 aa19■□□□□ 0.63
RPL39-202ENST00000468844 CBWD3Q5JTY5 395 aa19■□□□□ 0.63
RPL39-202ENST00000468844 CBWD5Q5RIA9 395 aa19■□□□□ 0.63
RPL39-202ENST00000468844 VSTM4Q8IW00 320 aa19■□□□□ 0.63
RPL39-202ENST00000468844 TMC2Q8TDI7 906 aa19■□□□□ 0.63
RPL39-202ENST00000468844 MMRN2Q9H8L6 949 aa19■□□□□ 0.63
RPL39-202ENST00000468844 TOPORSQ9NS56 1045 aaPredicted RBP19■□□□□ 0.63
RPL39-202ENST00000468844 CLTAP09496 248 aa19■□□□□ 0.63
RPL39-202ENST00000468844 ZSCAN20P17040 1043 aaPredicted RBP19■□□□□ 0.63
RPL39-202ENST00000468844 CDC25BP30305 580 aa19■□□□□ 0.63
RPL39-202ENST00000468844 CYP2C18P33260 490 aa19■□□□□ 0.63
RPL39-202ENST00000468844 FMO5P49326 533 aa19■□□□□ 0.63
RPL39-202ENST00000468844 CCL23P55773 120 aa19■□□□□ 0.63
RPL39-202ENST00000468844 CLDN10P78369 228 aa19■□□□□ 0.63
RPL39-202ENST00000468844 ENPEPQ07075 957 aa19■□□□□ 0.63
RPL39-202ENST00000468844 APBB1IPQ7Z5R6 666 aaPredicted RBP19■□□□□ 0.63
RPL39-202ENST00000468844 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19■□□□□ 0.63
RPL39-202ENST00000468844 SMG8Q8ND04 991 aaKnown RBP19■□□□□ 0.63
RPL39-202ENST00000468844 FAM84AQ96KN4 292 aa19■□□□□ 0.63
RPL39-202ENST00000468844 TMEM39AQ9NV64 488 aa19■□□□□ 0.63
RPL39-202ENST00000468844 SNTG2Q9NY99 539 aa19■□□□□ 0.63
RPL39-202ENST00000468844 TULP1O00294 542 aaPredicted RBP18.99■□□□□ 0.63
RPL39-202ENST00000468844 DSC3Q14574 896 aa18.99■□□□□ 0.63
RPL39-202ENST00000468844 KYAT1Q16773 422 aa18.99■□□□□ 0.63
RPL39-202ENST00000468844 FKBP15Q5T1M5 1219 aa18.99■□□□□ 0.63
RPL39-202ENST00000468844 LMBRD2Q68DH5 695 aaPredicted RBP18.99■□□□□ 0.63
RPL39-202ENST00000468844 USP37Q86T82 979 aa18.99■□□□□ 0.63
RPL39-202ENST00000468844 ERGIC2Q96RQ1 377 aa18.99■□□□□ 0.63
RPL39-202ENST00000468844 RPF1Q9H9Y2 349 aaKnown RBP18.99■□□□□ 0.63
RPL39-202ENST00000468844 FAM105AQ9NUU6 356 aa18.99■□□□□ 0.63
RPL39-202ENST00000468844 IPPQ9Y573 584 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms