RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 MAP2K1Q02750 393 aaPredicted RBP16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 MTF1Q14872 753 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 KYAT1Q16773 422 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 NBPF20Q3BBV1 942 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 EEF1DP3Q658K8 133 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 TAF2Q6P1X5 1199 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 CXCL17Q6UXB2 119 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 ZBTB33Q86T24 672 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 REXO1L1PQ8IX06 675 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 DNAJB3Q8WWF6 145 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 ZNF516Q92618 1163 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 FNBP1Q96RU3 617 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 CGRRF1Q99675 332 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 FAM49AQ9H0Q0 323 aaPredicted RBP16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 CDT1Q9H211 546 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 RBAKQ9NYW8 714 aaPredicted RBP16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 APEX2Q9UBZ4 518 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 GTF2IRD1Q9UHL9 959 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 PPP2R2CQ9Y2T4 447 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 FHOD1Q9Y613 1164 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 ADGRG1Q9Y653 693 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 SSU72P8A0A1W2PR75 194 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 USP27XA6NNY8 438 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 CABYRO75952 493 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 SERPING1P05155 500 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 DARSP14868 501 aaKnown RBP16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 ARF4P18085 180 aaPredicted RBP16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 CYLC1P35663 651 aaPredicted RBP16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 AP3M2P53677 418 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 ZNF568Q3ZCX4 644 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 ZBTB41Q5SVQ8 909 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 IQCEQ6IPM2 695 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 TOGARAM2Q6ZUX3 1019 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 SV2AQ7L0J3 742 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 FBXL13Q8NEE6 735 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 PPP1R13LQ8WUF5 828 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 PPP1R13BQ96KQ4 1090 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 POP1Q99575 1024 aaKnown RBP16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 STK33Q9BYT3 514 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 PDZD7Q9H5P4 517 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 PDE11AQ9HCR9 933 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 ARHGAP20Q9P2F6 1191 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 MYH10P35580 1976 aa16.26■□□□□ 0.19
CRAMP1-206ENST00000468839 A0A1B0GUA9 196 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 GOLGA6L9A6NEM1 432 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 EIF3CLB5ME19 914 aaKnown RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 TSPAN1O60635 241 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 ZC3H11AO75152 810 aaKnown RBP eCLIP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 NDUFA10O95299 355 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 INHAP05111 366 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 RPLP2P05387 115 aaKnown RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 CCDC175P0C221 793 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 DLATP10515 647 aaKnown RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 AXLP30530 894 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 GRK4P32298 578 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 CRYBB1P53674 252 aaPredicted RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 WNT7BP56706 349 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 PTPN11Q06124 597 aaPredicted RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 TMEM132AQ24JP5 1023 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 KIZQ2M2Z5 673 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 ZACNQ401N2 412 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 HGSNATQ68CP4 663 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 PHLDB3Q6NSJ2 640 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 IRF2BP2Q7Z5L9 587 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 RNF180Q86T96 592 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 RPAINQ86UA6 219 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 FMNL3Q8IVF7 1028 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 SCLT1Q96NL6 688 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 SPAG5Q96R06 1193 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 PPP1R16BQ96T49 567 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 EIF3CQ99613 913 aaKnown RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 TSEN34Q9BSV6 310 aaKnown RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 NHEJ1Q9H9Q4 299 aaPredicted RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 CDHR5Q9HBB8 845 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 HMX1Q9NP08 348 aaPredicted RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 TOPORSQ9NS56 1045 aaPredicted RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 RAB20Q9NX57 234 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 TRMT1Q9NXH9 659 aaKnown RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 DNAJC12Q9UKB3 198 aa16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 AJAP1Q9UKB5 411 aaPredicted RBP16.25■□□□□ 0.19
CRAMP1-206ENST00000468839 CSDE1O75534 798 aaKnown RBP16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 ERLIN2O94905 339 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 IL18RAPO95256 599 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 TUBB4AP04350 444 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 HARSP12081 509 aaKnown RBP16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 TNNI1P19237 187 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 EIF4BP23588 611 aaKnown RBP16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 TNFSF9P41273 254 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 PRKCIP41743 596 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 STAT1P42224 750 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 NCBP1Q09161 790 aaKnown RBP16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 RAPGEF1Q13905 1077 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 ASIC2Q16515 512 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 ASTE1Q2TB18 679 aaPredicted RBP16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 SLC9C1Q4G0N8 1177 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 LHX8Q68G74 356 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 GDF6Q6KF10 455 aaPredicted RBP16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 GJB7Q6PEY0 223 aa16.24■□□□□ 0.19
CRAMP1-206ENST00000468839 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms