RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 PEX3P56589 373 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 DSG1Q02413 1049 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 SIGLEC14Q08ET2 396 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 TUSC3Q13454 348 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 HSP90AA2PQ14568 343 aaPredicted RBP23.99■■□□□ 1.43
TTC28-204ENST00000468807 USP41Q3LFD5 358 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 ATF7IP2Q5U623 682 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 KIAA0319Q5VV43 1072 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 ELMSAN1Q6PJG2 1045 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 GPR149Q86SP6 731 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 GLYCTKQ8IVS8 523 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 SUGP1Q8IWZ8 645 aaKnown RBP23.99■■□□□ 1.43
TTC28-204ENST00000468807 KREMEN2Q8NCW0 462 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 PAAF1Q9BRP4 392 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 SMC3Q9UQE7 1217 aa23.99■■□□□ 1.43
TTC28-204ENST00000468807 K7ERI5 159 aa23.98■■□□□ 1.43
TTC28-204ENST00000468807 HIP1RO75146 1068 aa23.98■■□□□ 1.43
TTC28-204ENST00000468807 THP07101 528 aa23.98■■□□□ 1.43
TTC28-204ENST00000468807 MCM2P49736 904 aa23.98■■□□□ 1.43
TTC28-204ENST00000468807 DCAF4L1Q3SXM0 396 aa23.98■■□□□ 1.43
TTC28-204ENST00000468807 PALB2Q86YC2 1186 aa23.98■■□□□ 1.43
TTC28-204ENST00000468807 RIN2Q8WYP3 895 aaPredicted RBP23.98■■□□□ 1.43
TTC28-204ENST00000468807 C2orf16Q68DN1 1984 aa23.98■■□□□ 1.43
TTC28-204ENST00000468807 ZNF318Q5VUA4 2279 aa23.98■■□□□ 1.43
TTC28-204ENST00000468807 PTGESO14684 152 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 SF3B1O75533 1304 aaKnown RBP eCLIP23.97■■□□□ 1.438e-6■■■■■ 107
TTC28-204ENST00000468807 EFEMP2O95967 443 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 SPATA31D3P0C874 917 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 DMP1Q13316 513 aaPredicted RBP23.97■■□□□ 1.43
TTC28-204ENST00000468807 MTMR3Q13615 1198 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 NT5DC1Q5TFE4 455 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 SPATA31D4Q6ZUB0 917 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 CCDC149Q6ZUS6 474 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 APBB1IPQ7Z5R6 666 aaPredicted RBP23.97■■□□□ 1.43
TTC28-204ENST00000468807 PLIN2Q99541 437 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 MMTAG2Q9BU76 263 aaKnown RBP23.97■■□□□ 1.43
TTC28-204ENST00000468807 RUSC1Q9BVN2 902 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 CXCL16Q9H2A7 254 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 CHST7Q9NS84 486 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 DPP7Q9UHL4 492 aa23.97■■□□□ 1.43
TTC28-204ENST00000468807 PHLPP2Q6ZVD8 1323 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 VWA3AA6NCI4 1184 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 KIF4AO95239 1232 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 NPTX2P47972 431 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 ATP2C1P98194 919 aaPredicted RBP23.96■■□□□ 1.43
TTC28-204ENST00000468807 KCNK18Q7Z418 384 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 BMP8AQ7Z5Y6 402 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 CEP57Q86XR8 500 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 ACSF2Q96CM8 615 aaPredicted RBP23.96■■□□□ 1.43
TTC28-204ENST00000468807 DRC1Q96MC2 740 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 RXFP1Q9HBX9 757 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 KMT5AQ9NQR1 393 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.96■■□□□ 1.43
TTC28-204ENST00000468807 LIMD1Q9UGP4 676 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 SORCS3Q9UPU3 1222 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 DENND4AQ7Z401 1863 aa23.96■■□□□ 1.43
TTC28-204ENST00000468807 CCDC195A0A1B0GUA6 201 aa23.95■■□□□ 1.42
TTC28-204ENST00000468807 ASGR2P07307 311 aa23.95■■□□□ 1.42
TTC28-204ENST00000468807 RPL17P18621 184 aaKnown RBP23.95■■□□□ 1.42
TTC28-204ENST00000468807 RAD51AP2Q09MP3 1159 aa23.95■■□□□ 1.42
TTC28-204ENST00000468807 GLRA4Q5JXX5 417 aa23.95■■□□□ 1.42
TTC28-204ENST00000468807 RINT1Q6NUQ1 792 aa23.95■■□□□ 1.42
TTC28-204ENST00000468807 PLCD3Q8N3E9 789 aa23.95■■□□□ 1.42
TTC28-204ENST00000468807 CDK5RAP3Q96JB5 506 aa23.95■■□□□ 1.42
TTC28-204ENST00000468807 USTQ9Y2C2 406 aa23.95■■□□□ 1.42
TTC28-204ENST00000468807 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.95■■□□□ 1.42
TTC28-204ENST00000468807 ZDBF2Q9HCK1 2354 aa23.95■■□□□ 1.42
TTC28-204ENST00000468807 FAM171A1Q5VUB5 890 aa23.94■■□□□ 1.42
TTC28-204ENST00000468807 LARP1BQ659C4 914 aaKnown RBP23.94■■□□□ 1.42
TTC28-204ENST00000468807 PRSS55Q6UWB4 352 aaPredicted RBP23.94■■□□□ 1.42
TTC28-204ENST00000468807 C15orf39Q6ZRI6 1047 aa23.94■■□□□ 1.42
TTC28-204ENST00000468807 ZDHHC14Q8IZN3 488 aa23.94■■□□□ 1.42
TTC28-204ENST00000468807 DAW1Q8N136 415 aa23.94■■□□□ 1.42
TTC28-204ENST00000468807 FBXL6Q8N531 539 aa23.94■■□□□ 1.42
TTC28-204ENST00000468807 ASIC4Q96FT7 647 aa23.94■■□□□ 1.42
TTC28-204ENST00000468807 TBC1D32Q96NH3 1257 aa23.94■■□□□ 1.42
TTC28-204ENST00000468807 TRIP11Q15643 1979 aa23.94■■□□□ 1.42
TTC28-204ENST00000468807 MYH11P35749 1972 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 SFI1A8K8P3 1242 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 TGM5O43548 720 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 RFPL2O75678 378 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 BRD1O95696 1058 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 OSTNP61366 133 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 CREMQ03060 361 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 ZNF568Q3ZCX4 644 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 RTP2Q5QGT7 225 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 C1orf186Q6ZWK4 172 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 OTOP3Q7RTS5 596 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 MRPL4Q9BYD3 311 aaKnown RBP23.93■■□□□ 1.42
TTC28-204ENST00000468807 KCNH6Q9H252 994 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 SMOC2Q9H3U7 446 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 TNFSF13BQ9Y275 285 aa23.93■■□□□ 1.42
TTC28-204ENST00000468807 SLC16A4O15374 487 aa23.92■■□□□ 1.42
TTC28-204ENST00000468807 HARSP12081 509 aaKnown RBP23.92■■□□□ 1.42
TTC28-204ENST00000468807 YARSP54577 528 aaKnown RBP23.92■■□□□ 1.42
TTC28-204ENST00000468807 UBALD2Q8IYN6 164 aa23.92■■□□□ 1.42
TTC28-204ENST00000468807 CEP120Q8N960 986 aa23.92■■□□□ 1.42
TTC28-204ENST00000468807 SMG7Q92540 1137 aaKnown RBP23.92■■□□□ 1.42
TTC28-204ENST00000468807 PNMA5Q96PV4 448 aa23.92■■□□□ 1.42
TTC28-204ENST00000468807 ACO2Q99798 780 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms