RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 C7orf25Q9BPX7 421 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.88□□□□□ -1.79
TRIM59-202ENST00000468542 SH2D3AQ9BRG2 576 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 REEP2Q9BRK0 252 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 FDXACB1Q9BRP7 624 aaPredicted RBP3.88□□□□□ -1.79
TRIM59-202ENST00000468542 RUSC1Q9BVN2 902 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 CCDC113Q9H0I3 377 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 POLR3FQ9H1D9 316 aaPredicted RBP3.88□□□□□ -1.79
TRIM59-202ENST00000468542 AGO3Q9H9G7 860 aaKnown RBP3.88□□□□□ -1.79
TRIM59-202ENST00000468542 UBN1Q9NPG3 1134 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 RGS18Q9NS28 235 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 AGPAT5Q9NUQ2 364 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 TMEM161AQ9NX61 479 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 ST3GAL5Q9UNP4 418 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 MAP4K5Q9Y4K4 846 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 PCDHA11Q9Y5I1 949 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 SLC4A7Q9Y6M7 1214 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 VCANP13611 3396 aa3.88□□□□□ -1.79
TRIM59-202ENST00000468542 TDRD15B5MCY1 1934 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 DENND3A2RUS2 1198 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 MYMKA6NI61 221 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 LRRIQ4A6NIV6 560 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 CFAP99D6REC4 459 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 GOLGA6L22H0YM25 854 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 INO80B-WBP1J3KQ70 363 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 K7ERI5 159 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ENPP3O14638 875 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 N4BP3O15049 544 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 KIAA0391O15091 583 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 EIF3DO15371 548 aaKnown RBP eCLIP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 POLR2DO15514 142 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 TRAK2O60296 914 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 TSPAN1O60635 241 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 TOM1L1O75674 476 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 FAM13AO94988 1023 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ZNF202O95125 648 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 KIF20AO95235 890 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 SSBP05455 408 aaKnown RBP eCLIP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 KRT18P05783 430 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 SRGAP2CP0DJJ0 459 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ATP2A2P16615 1042 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 PROZP22891 400 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 CD52P31358 61 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 PPP1R2P41236 205 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 SYKP43405 635 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 SARSP49591 514 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 NDUFA8P51970 172 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 NCKAP1LP55160 1127 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 WDR4P57081 412 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 GTF2BQ00403 316 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 STRN3Q13033 797 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 PSMD2Q13200 908 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 PRPF4BQ13523 1007 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 SNW1Q13573 536 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 MCM6Q14566 821 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 KCNB1Q14721 858 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 SHHQ15465 462 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ZRSR1Q15695 479 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 BMT2Q1RMZ1 405 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 DCAF4L1Q3SXM0 396 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 COBLL1Q53SF7 1204 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 SPECC1Q5M775 1068 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 NT5DC1Q5TFE4 455 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 FOXD4L5Q5VV16 416 aaPredicted RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 SLC27A1Q6PCB7 646 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 FOXR2Q6PJQ5 311 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 KRBA2Q6ZNG9 492 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 UNC13DQ70J99 1090 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 OTOP2Q7RTS6 562 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 CATSPER4Q7RTX7 472 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ZNF720Q7Z2F6 126 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 HAUS6Q7Z4H7 955 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 DEFB128Q7Z7B8 93 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 MRPL10Q7Z7H8 261 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 MAP4K3Q8IVH8 894 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 HERC6Q8IVU3 1022 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 FAM178BQ8IXR5 827 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 CCDC65Q8IXS2 484 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 CMTR2Q8IYT2 770 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 HACE1Q8IYU2 909 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 FMR1NBQ8N0W7 255 aaPredicted RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 PDILTQ8N807 584 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ARMC2Q8NEN0 867 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ENGASEQ8NFI3 743 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 PPP1R13LQ8WUF5 828 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 FOXD4L4Q8WXT5 416 aaPredicted RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 BSNDQ8WZ55 320 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 DHX58Q96C10 678 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 PGBD4Q96DM1 585 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ZBTB10Q96DT7 871 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 GSDMAQ96QA5 445 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 RAD9AQ99638 391 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ADAM2Q99965 735 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 ADPGKQ9BRR6 497 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 STRA6Q9BX79 667 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 C1QTNF2Q9BXJ5 285 aa3.87□□□□□ -1.79
TRIM59-202ENST00000468542 MRPL9Q9BYD2 267 aaKnown RBP3.87□□□□□ -1.79
TRIM59-202ENST00000468542 MRPL4Q9BYD3 311 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms