RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ATF7P17544 494 aaPredicted RBP16.57■□□□□ 0.24
SNIP1-202ENST00000468040 IBSPP21815 317 aaPredicted RBP16.57■□□□□ 0.24
SNIP1-202ENST00000468040 OSTNP61366 133 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 DEFB103AP81534 67 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 ADAM9Q13443 819 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 RASIP1Q5U651 963 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 CRIPAKQ8N1N5 446 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 CEP120Q8N960 986 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 TOP1MTQ969P6 601 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 SAAL1Q96ER3 474 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 RNPC3Q96LT9 517 aaKnown RBP16.57■□□□□ 0.24
SNIP1-202ENST00000468040 FBXL18Q96ME1 805 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 FAM213AQ9BRX8 229 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 ANP32EQ9BTT0 268 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 APOL6Q9BWW8 343 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 DNAJC25Q9H1X3 360 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 SNTG2Q9NY99 539 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 CXXC1Q9P0U4 656 aaPredicted RBP16.57■□□□□ 0.24
SNIP1-202ENST00000468040 CPSF3Q9UKF6 684 aaKnown RBP16.57■□□□□ 0.24
SNIP1-202ENST00000468040 FRMD4BQ9Y2L6 1034 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 GIT1Q9Y2X7 761 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 TTC3P53804 2025 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 ZNF233A6NK53 670 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 RECQL4O94761 1208 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 FGFR1OPO95684 399 aaKnown RBP16.56■□□□□ 0.24
SNIP1-202ENST00000468040 ACOT2P49753 483 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 STX17P56962 302 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 SHHQ15465 462 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 SNRNP35Q16560 246 aaKnown RBP16.56■□□□□ 0.24
SNIP1-202ENST00000468040 ANO6Q4KMQ2 910 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 C9orf50Q5SZB4 431 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 GLB1LQ6UWU2 654 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 C11orf57Q6ZUT1 292 aaPredicted RBP16.56■□□□□ 0.24
SNIP1-202ENST00000468040 ABI1Q8IZP0 508 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 CSGALNACT2Q8N6G5 542 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 NOC3LQ8WTT2 800 aaKnown RBP16.56■□□□□ 0.24
SNIP1-202ENST00000468040 CEP63Q96MT8 703 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 RPF1Q9H9Y2 349 aaKnown RBP16.56■□□□□ 0.24
SNIP1-202ENST00000468040 RSAD1Q9HA92 442 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 PLEKHA5Q9HAU0 1116 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 PARP2Q9UGN5 583 aa16.56■□□□□ 0.24
SNIP1-202ENST00000468040 GOLGA8IPA6NC78 632 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 GOLGA8JA6NMD2 632 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 UPP2O95045 317 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 ATP2A2P16615 1042 aaKnown RBP16.55■□□□□ 0.24
SNIP1-202ENST00000468040 AKAP5P24588 427 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 TPD52L1Q16890 204 aaPredicted RBP16.55■□□□□ 0.24
SNIP1-202ENST00000468040 SEZ6Q53EL9 994 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 ZBTB41Q5SVQ8 909 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 CEP135Q66GS9 1140 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 CRELD2Q6UXH1 353 aaPredicted RBP16.55■□□□□ 0.24
SNIP1-202ENST00000468040 AGMOQ6ZNB7 445 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 ZC3H3Q8IXZ2 948 aaKnown RBP16.55■□□□□ 0.24
SNIP1-202ENST00000468040 ENOX1Q8TC92 643 aaKnown RBP16.55■□□□□ 0.24
SNIP1-202ENST00000468040 LPPQ93052 612 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 DUSP9Q99956 384 aaKnown RBP16.55■□□□□ 0.24
SNIP1-202ENST00000468040 BPIFA3Q9BQP9 254 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 MKNK1Q9BUB5 465 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
SNIP1-202ENST00000468040 RBAKQ9NYW8 714 aaPredicted RBP16.55■□□□□ 0.24
SNIP1-202ENST00000468040 MAPK13O15264 365 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 SLC16A3O15427 465 aaKnown RBP16.54■□□□□ 0.24
SNIP1-202ENST00000468040 CXCL8P10145 99 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 EPB41P11171 864 aaKnown RBP16.54■□□□□ 0.24
SNIP1-202ENST00000468040 PSMC2P35998 433 aaKnown RBP16.54■□□□□ 0.24
SNIP1-202ENST00000468040 TNFSF9P41273 254 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 ZNF445P59923 1031 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 PPP2R3AQ06190 1150 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 ENOX2Q16206 610 aaKnown RBP16.54■□□□□ 0.24
SNIP1-202ENST00000468040 SPATA1Q5VX52 437 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 LRSAM1Q6UWE0 723 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 LRRC55Q6ZSA7 311 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 CBWD2Q8IUF1 395 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 HERC6Q8IVU3 1022 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 BRSK2Q8IWQ3 736 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 CD302Q8IX05 232 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 TMEM192Q8IY95 271 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 SNX27Q96L92 541 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 RPS6KC1Q96S38 1066 aa16.54■□□□□ 0.24
SNIP1-202ENST00000468040 ARL5CA6NH57 179 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 MEIS3P2A8K0S8 358 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 INPPL1O15357 1258 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 OFD1O75665 1012 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 DGKIO75912 1065 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 IL18RAPO95256 599 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 GJB5O95377 273 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 GNA14O95837 355 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 FGFR1P11362 822 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 MLH1P40692 756 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 ZNF165P49910 485 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 MYL5Q02045 173 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 SURF1Q15526 300 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 SLC10A6Q3KNW5 377 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 CLLU1OSQ5K130 101 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 USP37Q86T82 979 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 FAM186BQ8IYM0 893 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 TDHQ8IZJ6 230 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 RDH13Q8NBN7 331 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 ZSWIM2Q8NEG5 633 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 URGCPQ8TCY9 931 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms