RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	RBSN	Q9H1K0	784 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	CD320	Q9NPF0	282 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	PANK4	Q9NVE7	773 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	SPG21	Q9NZD8	308 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	PUF60	Q9UHX1	559 aa	Known RBP	13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	FAM50B	Q9Y247	325 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	PCDHB2	Q9Y5E7	798 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	MUC3A	Q02505	3323 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663		A0A087WWV3	80 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	BICDL2	A1A5D9	508 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	MEIS3P2	A8K0S8	358 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	BIN1	O00499	593 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	PSMA7	O14818	248 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	TBCA	O75347	108 aa	Known RBP	13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	OFD1	O75665	1012 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	IDE	P14735	1019 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	GLRA2	P23416	452 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	AXL	P30530	894 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	PBX3	P40426	434 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	KRT17	Q04695	432 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	ALCAM	Q13740	583 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	CAPS	Q13938	189 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	GIT2	Q14161	759 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	DHX8	Q14562	1220 aa	Known RBP	13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	NOMO2	Q5JPE7	1267 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	GLB1L	Q6UWU2	654 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	RBM23	Q86U06	439 aa	Known RBP	13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	MCPH1	Q8NEM0	835 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	ASAP3	Q8TDY4	903 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	ERCC4	Q92889	916 aa	Predicted RBP	13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	MSLNL	Q96KJ4	702 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	DRC1	Q96MC2	740 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	CDCA3	Q99618	268 aa	Predicted RBP	13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	NFKBIZ	Q9BYH8	718 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	TLE6	Q9H808	572 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	CBX8	Q9HC52	389 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	NGRN	Q9NPE2	291 aa	Known RBP	13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	OLFML3	Q9NRN5	406 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	CLEC1B	Q9P126	229 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	LARS	Q9P2J5	1176 aa	Known RBP	13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	PRKAG3	Q9UGI9	489 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	PLXNA4	Q9HCM2	1894 aa		13.22	□□□□□ -0.29
CTNS-205	ENST00000467663	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	CARNS1	A5YM72	827 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	MBTPS2	O43462	519 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	TSPAN1	O60635	241 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	ERLIN2	O94905	339 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	GLP2R	O95838	553 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	ALDH7A1	P49419	539 aa	Known RBP	13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	NDUFV1	P49821	464 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	ZNF131	P52739	623 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	BCAR1	P56945	870 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	MYL5	Q02045	173 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	MBTD1	Q05BQ5	628 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	SMAD4	Q13485	552 aa	Known RBP	13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	IQCB1	Q15051	598 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	SMAD2	Q15796	467 aa	Known RBP	13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	AMHR2	Q16671	573 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	DUSP6	Q16828	381 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	ARSH	Q5FYA8	562 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	PADI6	Q6TGC4	694 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	AGMO	Q6ZNB7	445 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	DYM	Q7RTS9	669 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	GJD3	Q8N144	294 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	GUF1	Q8N442	669 aa	Known RBP	13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	TCF25	Q9BQ70	676 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	NRDE2	Q9H7Z3	1164 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	TBC1D13	Q9NVG8	400 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	CD207	Q9UJ71	328 aa		13.21	□□□□□ -0.29
CTNS-205	ENST00000467663	UBE4B	O95155	1302 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	CNTNAP2	Q9UHC6	1331 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	C19orf67	A6NJJ6	358 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663		H0YCG3	227 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	INO80B-WBP1	J3KQ70	363 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	PER2	O15055	1255 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	USO1	O60763	962 aa	Known RBP	13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	FAM13A	O94988	1023 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	BMP6	P22004	513 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	NCBP1	Q09161	790 aa	Known RBP	13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	COASY	Q13057	564 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	KCNC3	Q14003	757 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	FAM26F	Q5R3K3	315 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	NOTUM	Q6P988	496 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	TMEM184A	Q6ZMB5	413 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	ADSSL1	Q8N142	457 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	SMG8	Q8ND04	991 aa	Known RBP	13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	VN1R2	Q8NFZ6	395 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	NOC3L	Q8WTT2	800 aa	Known RBP	13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	KIFAP3	Q92845	792 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	CCDC51	Q96ER9	411 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	REEP2	Q9BRK0	252 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	C1QTNF1	Q9BXJ1	281 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	EPHX3	Q9H6B9	360 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	PARVG	Q9HBI0	331 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	RWDD2A	Q9UIY3	292 aa		13.2	□□□□□ -0.3
CTNS-205	ENST00000467663	PPP1R3G	B7ZBB8	358 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms