RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SMARCA5O60264 1052 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-207ENST00000467273 CILPO75339 1184 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 RAC2P15153 192 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 TAPT1Q6NXT6 567 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 C16orf86Q6ZW13 317 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 MORC4Q8TE76 937 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 ARHGAP45Q92619 1136 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 KCNN1Q92952 543 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 LRRC3Q9BY71 257 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 LMAN2LQ9H0V9 348 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 ZCCHC4Q9H5U6 513 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 ACAD9Q9H845 621 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 ALG13Q9NP73 1137 aaKnown RBP6.43□□□□□ -1.38
PTCD3-207ENST00000467273 PARD6AQ9NPB6 346 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 NYAP2Q9P242 653 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 FEM1BQ9UK73 627 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 MAPK8IP1Q9UQF2 711 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 PTPRZ1P23471 2315 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-207ENST00000467273 EPG5Q9HCE0 2579 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 PLXNA3P51805 1871 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 TET1Q8NFU7 2136 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 RIF1Q5UIP0 2472 aaKnown RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 FAM186AA6NE01 2351 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 PRR23AA6NEV1 266 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 F5H6K3 240 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 MBTPS2O43462 519 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 EOMESO95936 686 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 GNAI2P04899 355 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 BMP7P18075 431 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 NCLP19338 710 aaKnown RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 MCM4P33991 863 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 ETFBP38117 255 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 NBL1P41271 181 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 ID4P47928 161 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 CDK8P49336 464 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 HTRA4P83105 476 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 ZXDAP98168 799 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 SETQ01105 290 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 CNTN2Q02246 1040 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 KLRC3Q07444 240 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 SIGLEC14Q08ET2 396 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 SMAD4Q13485 552 aaKnown RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 COL9A2Q14055 689 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 MPP2Q14168 576 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 CCDC184Q52MB2 194 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 C12orf60Q5U649 245 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 CCDC81Q6ZN84 652 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 LRRC8DQ7L1W4 858 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 SESTD1Q86VW0 696 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 CPXCR1Q8N123 301 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 GPBAR1Q8TDU6 330 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 ANKS1AQ92625 1134 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 ATOH1Q92858 354 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 CCDC120Q96HB5 630 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 ALPK1Q96QP1 1244 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 BRMS1Q9HCU9 246 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 A1CFQ9NQ94 594 aaKnown RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 SEMA3GQ9NS98 782 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 SLAMF8Q9P0V8 285 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 ADD3Q9UEY8 706 aaKnown RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 DBNLQ9UJU6 430 aaKnown RBP6.42□□□□□ -1.38
PTCD3-207ENST00000467273 MTUS1Q9ULD2 1270 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 PPT2Q9UMR5 302 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 RALGAPA2Q2PPJ7 1873 aa6.42□□□□□ -1.38
PTCD3-207ENST00000467273 DMXL1Q9Y485 3027 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 CACNA1BQ00975 2339 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 PNMA6EA0A0J9YXQ4 647 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 STXBP3O00186 592 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 PLA2G6O60733 806 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 EYA4O95677 639 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 NDUFB10O96000 172 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 LTBRP36941 435 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 DEFB103AP81534 67 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 RPL6Q02878 288 aaKnown RBP6.41□□□□□ -1.38
PTCD3-207ENST00000467273 CBX2Q14781 532 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-207ENST00000467273 PTGISQ16647 500 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 EPC2Q52LR7 807 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 TCEAL5Q5H9L2 206 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 FAM47CQ5HY64 1035 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 SLC9C2Q5TAH2 1124 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 MCTP2Q6DN12 878 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 REC114Q7Z4M0 266 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 RPAINQ86UA6 219 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 MFSD4AQ8N468 514 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 CPLX3Q8WVH0 158 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 DYNLL2Q96FJ2 89 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 NAP1L5Q96NT1 182 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-207ENST00000467273 C17orf80Q9BSJ5 609 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 FSD1Q9BTV5 496 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 SRRTQ9BXP5 876 aaKnown RBP6.41□□□□□ -1.38
PTCD3-207ENST00000467273 WDR11Q9BZH6 1224 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 RAVER2Q9HCJ3 691 aaKnown RBP6.41□□□□□ -1.38
PTCD3-207ENST00000467273 CLDND1Q9NY35 253 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 CACNA2D2Q9NY47 1150 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 STRIP2Q9ULQ0 834 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 TPX2Q9ULW0 747 aaKnown RBP6.41□□□□□ -1.38
PTCD3-207ENST00000467273 NOB1Q9ULX3 412 aaKnown RBP6.41□□□□□ -1.38
PTCD3-207ENST00000467273 NOP58Q9Y2X3 529 aaKnown RBP6.41□□□□□ -1.38
PTCD3-207ENST00000467273 GVINP1Q7Z2Y8 2422 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms