RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 COL19A1Q14993 1142 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 ZBTB33Q86T24 672 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 MAP4K3Q8IVH8 894 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 COLGALT2Q8IYK4 626 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 HLA-CQ95604 372 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 MARCH5Q9NX47 278 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 MIOSQ9NXC5 875 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 FAM13BQ9NYF5 915 aa14.14□□□□□ -0.15
COL5A1-206ENST00000465877 PRG3Q9Y2Y8 225 aaPredicted RBP14.14□□□□□ -0.15
COL5A1-206ENST00000465877 POLR2DO15514 142 aaKnown RBP14.13□□□□□ -0.15
COL5A1-206ENST00000465877 GAP43P17677 238 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 ABCD1P33897 745 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 LIG4P49917 911 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 IQUBQ8NA54 791 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 ATXN2LQ8WWM7 1075 aaKnown RBP14.13□□□□□ -0.15
COL5A1-206ENST00000465877 STAMQ92783 540 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 PABPC5Q96DU9 382 aaKnown RBP14.13□□□□□ -0.15
COL5A1-206ENST00000465877 ZBTB45Q96K62 511 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-206ENST00000465877 TCHPQ9BT92 498 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 CCDC94Q9BW85 323 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-206ENST00000465877 VN1R3Q9BXE9 311 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 ZBP1Q9H171 429 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 CXCL16Q9H2A7 254 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 MAGEF1Q9HAY2 307 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 KBTBD4Q9NVX7 518 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 SEL1LQ9UBV2 794 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 PUF60Q9UHX1 559 aaKnown RBP14.13□□□□□ -0.15
COL5A1-206ENST00000465877 TBX20Q9UMR3 447 aa14.13□□□□□ -0.15
COL5A1-206ENST00000465877 DENND4AQ7Z401 1863 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 NRP1O14786 923 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 TBX10O75333 385 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 PPP1R37O75864 691 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 PIGRP01833 764 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 IDEP14735 1019 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 GTF2F1P35269 517 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL5A1-206ENST00000465877 MATR3P43243 847 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL5A1-206ENST00000465877 OR1G1P47890 313 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 OSTNP61366 133 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 NUCB2P80303 420 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 GTF2BQ00403 316 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 MCL1Q07820 350 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 SMC1AQ14683 1233 aaKnown RBP14.12□□□□□ -0.15
COL5A1-206ENST00000465877 NAB2Q15742 525 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 GLRA4Q5JXX5 417 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 PDE12Q6L8Q7 609 aaKnown RBP14.12□□□□□ -0.15
COL5A1-206ENST00000465877 DDX53Q86TM3 631 aaKnown RBP14.12□□□□□ -0.15
COL5A1-206ENST00000465877 MICAL1Q8TDZ2 1067 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 HVCN1Q96D96 273 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 SNX27Q96L92 541 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 TRIM9Q9C026 710 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 HAPLN2Q9GZV7 340 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 SCAND2PQ9GZW5 306 aaPredicted RBP14.12□□□□□ -0.15
COL5A1-206ENST00000465877 ST6GALNAC4Q9H4F1 302 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 NGRNQ9NPE2 291 aaKnown RBP14.12□□□□□ -0.15
COL5A1-206ENST00000465877 OLFML3Q9NRN5 406 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 TOPORSQ9NS56 1045 aaPredicted RBP14.12□□□□□ -0.15
COL5A1-206ENST00000465877 CLDND1Q9NY35 253 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 FAN1Q9Y2M0 1017 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 CUL9Q8IWT3 2517 aa14.12□□□□□ -0.15
COL5A1-206ENST00000465877 C2orf16Q68DN1 1984 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 CASTOR2A6NHX0 329 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 HIDE1A8MVS5 230 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 F8W810 466 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 LINC01565O15544 149 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 CLDN3O15551 220 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 GCNT3O95395 438 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 THP07101 528 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 PFKFB1P16118 471 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 KCNA5P22460 613 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 CA8P35219 290 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 NRIP1P48552 1158 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 KCNQ1P51787 676 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 YARSP54577 528 aaKnown RBP14.11□□□□□ -0.15
COL5A1-206ENST00000465877 MRPS5P82675 430 aaKnown RBP14.11□□□□□ -0.15
COL5A1-206ENST00000465877 COASYQ13057 564 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 TUSC3Q13454 348 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 AAK1Q2M2I8 961 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 ZC2HC1CQ53FD0 456 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-206ENST00000465877 TJAP1Q5JTD0 557 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 SLC39A4Q6P5W5 647 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 TMC7Q7Z402 723 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 VPS52Q8N1B4 723 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 PYM1Q9BRP8 204 aaKnown RBP14.11□□□□□ -0.15
COL5A1-206ENST00000465877 HERC2P3Q9BVR0 1158 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 LRRC27Q9C0I9 530 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 MRPL44Q9H9J2 332 aaKnown RBP14.11□□□□□ -0.15
COL5A1-206ENST00000465877 PANK4Q9NVE7 773 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 CACNG4Q9UBN1 327 aa14.11□□□□□ -0.15
COL5A1-206ENST00000465877 MTCL1Q9Y4B5 1905 aaKnown RBP14.1□□□□□ -0.15
COL5A1-206ENST00000465877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.1□□□□□ -0.15
COL5A1-206ENST00000465877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.1□□□□□ -0.15
COL5A1-206ENST00000465877 FSD2A1L4K1 749 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 NCK2O43639 380 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 NR1I2O75469 434 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 ALDH2P05091 517 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 CTSAP10619 480 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 CASP5P51878 434 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 ASIC1P78348 528 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 AMPD3Q01432 767 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 CTC1Q2NKJ3 1217 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms