RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 PIGRP01833 764 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 LAG3P18627 525 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 ABCD1P33897 745 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 NOLC1Q14978 699 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHPF2-202ENST00000465601 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 FAM26FQ5R3K3 315 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 SLC39A4Q6P5W5 647 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 KCNT2Q6UVM3 1135 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 GSTCDQ8NEC7 633 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 ENGASEQ8NFI3 743 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 RSPH1Q8WYR4 309 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 HVCN1Q96D96 273 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 FAM193BQ96PV7 902 aaPredicted RBP13.55□□□□□ -0.24
CHPF2-202ENST00000465601 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 C11orf84Q9BUA3 381 aaPredicted RBP13.55□□□□□ -0.24
CHPF2-202ENST00000465601 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
CHPF2-202ENST00000465601 ALG13Q9NP73 1137 aaKnown RBP13.55□□□□□ -0.24
CHPF2-202ENST00000465601 COL4A4P53420 1690 aaPredicted RBP13.54□□□□□ -0.24
CHPF2-202ENST00000465601 NT5C1B-RDH14C9J2C7 533 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 GRM6O15303 877 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 INPPL1O15357 1258 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 ZC3H11AO75152 810 aaKnown RBP eCLIP13.54□□□□□ -0.24
CHPF2-202ENST00000465601 ITGB1P05556 798 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 GRM5P41594 1212 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 BCAR1P56945 870 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 FAM160A1Q05DH4 1040 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 MCL1Q07820 350 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 EHHADHQ08426 723 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 SNW1Q13573 536 aaKnown RBP13.54□□□□□ -0.24
CHPF2-202ENST00000465601 L1TD1Q5T7N2 865 aaKnown RBP13.54□□□□□ -0.24
CHPF2-202ENST00000465601 SYCP3Q8IZU3 236 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 P2RX5Q93086 422 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 ZNF558Q96NG5 402 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 ACAP3Q96P50 834 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 RPS6KC1Q96S38 1066 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 DNAJB4Q9UDY4 337 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 PLAGL2Q9UPG8 496 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 STXBP5LQ9Y2K9 1186 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 MTCH2Q9Y6C9 303 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 REV3LO60673 3130 aa13.54□□□□□ -0.24
CHPF2-202ENST00000465601 FGF18O76093 207 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 CSPG5O95196 566 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 GALTP07902 379 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 SLC11A1P49279 550 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 ALDH7A1P49419 539 aaKnown RBP13.53□□□□□ -0.24
CHPF2-202ENST00000465601 ALCAMQ13740 583 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 KMT5BQ4FZB7 885 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 TMEM87AQ8NBN3 555 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 SPPL3Q8TCT6 385 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 SLC39A2Q9NP94 309 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 SPG21Q9NZD8 308 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 EYSQ5T1H1 3165 aa13.53□□□□□ -0.24
CHPF2-202ENST00000465601 ATG2AQ2TAZ0 1938 aa13.52□□□□□ -0.24
CHPF2-202ENST00000465601 A0A0B4J269 797 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 PTGESO14684 152 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.25
CHPF2-202ENST00000465601 NR1I2O75469 434 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 RPN1P04843 607 aaKnown RBP13.52□□□□□ -0.25
CHPF2-202ENST00000465601 ALDH2P05091 517 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 MYL1P05976 194 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 POU3F3P20264 500 aaPredicted RBP13.52□□□□□ -0.25
CHPF2-202ENST00000465601 DNAJB1P25685 340 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 TNFSF9P41273 254 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
CHPF2-202ENST00000465601 DPYDQ12882 1025 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 CCDC85BQ15834 202 aaPredicted RBP13.52□□□□□ -0.25
CHPF2-202ENST00000465601 ZBTB41Q5SVQ8 909 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 SLFN12LQ6IEE8 588 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 KANK3Q6NY19 840 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 STXBP4Q6ZWJ1 553 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 EPM2AIP1Q7L775 607 aaPredicted RBP13.52□□□□□ -0.25
CHPF2-202ENST00000465601 COLGALT2Q8IYK4 626 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 SLC39A11Q8N1S5 342 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 ZNF507Q8TCN5 953 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 PPM1EQ8WY54 764 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 MSTO1Q9BUK6 570 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 EXOC1Q9NV70 894 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 STYXL1Q9Y6J8 313 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 ZMYM2Q9UBW7 1377 aa13.52□□□□□ -0.25
CHPF2-202ENST00000465601 PDCD11Q14690 1871 aaKnown RBP13.51□□□□□ -0.25
CHPF2-202ENST00000465601 NRP1O14786 923 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 OGTO15294 1046 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 MEFVO15553 781 aaPredicted RBP13.51□□□□□ -0.25
CHPF2-202ENST00000465601 THP07101 528 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 CLTAP09496 248 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 CXCL8P10145 99 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 ADSSP30520 456 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 HOXD13P35453 343 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 PPM1AP35813 382 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 OR1G1P47890 313 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 DSC1Q08554 894 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 GRIK3Q13003 919 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 STK4Q13043 487 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 PNOCQ13519 176 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 CAMK1Q14012 370 aa13.51□□□□□ -0.25
CHPF2-202ENST00000465601 POSTNQ15063 836 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms