RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
TMCO3-205ENST00000465556 USP49Q70CQ1 688 aa13.2□□□□□ -0.3
TMCO3-205ENST00000465556 ADHFE1Q8IWW8 467 aa13.2□□□□□ -0.3
TMCO3-205ENST00000465556 RNF168Q8IYW5 571 aaPredicted RBP13.2□□□□□ -0.3
TMCO3-205ENST00000465556 GJD3Q8N144 294 aa13.2□□□□□ -0.3
TMCO3-205ENST00000465556 TMEM161BQ8NDZ6 487 aa13.2□□□□□ -0.3
TMCO3-205ENST00000465556 LARP4BQ92615 738 aaKnown RBP13.2□□□□□ -0.3
TMCO3-205ENST00000465556 ACO2Q99798 780 aaKnown RBP13.2□□□□□ -0.3
TMCO3-205ENST00000465556 REEP2Q9BRK0 252 aa13.2□□□□□ -0.3
TMCO3-205ENST00000465556 TARS2Q9BW92 718 aaKnown RBP13.2□□□□□ -0.3
TMCO3-205ENST00000465556 DAXXQ9UER7 740 aaPredicted RBP13.2□□□□□ -0.3
TMCO3-205ENST00000465556 GDAQ9Y2T3 454 aa13.2□□□□□ -0.3
TMCO3-205ENST00000465556 USP15Q9Y4E8 981 aaPredicted RBP13.2□□□□□ -0.3
TMCO3-205ENST00000465556 SRPRBQ9Y5M8 271 aaKnown RBP13.2□□□□□ -0.3
TMCO3-205ENST00000465556 DOCK8Q8NF50 2099 aa13.2□□□□□ -0.3
TMCO3-205ENST00000465556 DOCK6Q96HP0 2047 aa13.2□□□□□ -0.3
TMCO3-205ENST00000465556 ABLIM1O14639 778 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 NR1I2O75469 434 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 EFEMP2O95967 443 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 SOD2P04179 222 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 MAPTP10636 758 aaKnown RBP13.19□□□□□ -0.3
TMCO3-205ENST00000465556 SSTR3P32745 418 aaPredicted RBP13.19□□□□□ -0.3
TMCO3-205ENST00000465556 SMTNP53814 917 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 NCKAP1LP55160 1127 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 TUSC3Q13454 348 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 DHX8Q14562 1220 aaKnown RBP13.19□□□□□ -0.3
TMCO3-205ENST00000465556 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 ANKRD54Q6NXT1 300 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 FUT10Q6P4F1 479 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 CEP120Q8N960 986 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 CASP10Q92851 521 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 EPSTI1Q96J88 318 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
TMCO3-205ENST00000465556 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
TMCO3-205ENST00000465556 CXCL16Q9H2A7 254 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 PTPRHQ9HD43 1115 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 LARSQ9P2J5 1176 aaKnown RBP13.19□□□□□ -0.3
TMCO3-205ENST00000465556 CACNG4Q9UBN1 327 aa13.19□□□□□ -0.3
TMCO3-205ENST00000465556 TSC2P49815 1807 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 CASTOR2A6NHX0 329 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 FAM13AO94988 1023 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 THP07101 528 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 PROZP22891 400 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 TXLNAP40222 546 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 GRM5P41594 1212 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 NASPP49321 788 aaPredicted RBP13.18□□□□□ -0.3
TMCO3-205ENST00000465556 GLUD2P49448 558 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 ZNF131P52739 623 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 STRN3Q13033 797 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 SLC39A14Q15043 492 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 NAB2Q15742 525 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 GLRA4Q5JXX5 417 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 MPZL3Q6UWV2 235 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 SUSD6Q92537 303 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 KHSRPQ92945 711 aaKnown RBP eCLIP13.18□□□□□ -0.33e-6■■□□□ 12.5
TMCO3-205ENST00000465556 KCNN1Q92952 543 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 CLIC6Q96NY7 704 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 PAAF1Q9BRP4 392 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
TMCO3-205ENST00000465556 COLEC11Q9BWP8 271 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 ANKFY1Q9P2R3 1169 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 STK17AQ9UEE5 414 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 KCNG1Q9UIX4 513 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 ADAM28Q9UKQ2 775 aa13.18□□□□□ -0.3
TMCO3-205ENST00000465556 SF3B1O75533 1304 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 TECTAO75443 2155 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 C19orf67A6NJJ6 358 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 H0YCG3 227 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 K7ENM7 598 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 C2CD2LO14523 706 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 KIF4AO95239 1232 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 BRD1O95696 1058 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 KRT18P05783 430 aaKnown RBP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 MCF2P10911 925 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 HARSP12081 509 aaKnown RBP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 EPCAMP16422 314 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 HOXB8P17481 243 aaPredicted RBP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 HSP90AA2PQ14568 343 aaPredicted RBP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 STK38Q15208 465 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 TPRNQ4KMQ1 711 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 ZPBP2Q6X784 338 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 HAUS6Q7Z4H7 955 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 ZBTB33Q86T24 672 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 KRI1Q8N9T8 703 aaKnown RBP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 HASPINQ8TF76 798 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 RABGGTAQ92696 567 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 SNX27Q96L92 541 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 PPP1R10Q96QC0 940 aaKnown RBP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 APOL5Q9BWW9 433 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 EMILIN2Q9BXX0 1053 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 S1PR5Q9H228 398 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 PARVGQ9HBI0 331 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 MRPL17Q9NRX2 175 aaKnown RBP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 TOPORSQ9NS56 1045 aaPredicted RBP13.17□□□□□ -0.3
TMCO3-205ENST00000465556 DZANK1Q9NVP4 752 aa13.17□□□□□ -0.3
TMCO3-205ENST00000465556 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms