RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 MGEA5O60502 916 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 MCF2P10911 925 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 ITGB8P26012 769 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 AXLP30530 894 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 RFC2P35250 354 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 DLG4P78352 724 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 TCERG1LQ5VWI1 586 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 TWF2Q6IBS0 349 aaKnown RBP18.73■□□□□ 0.59
PTPRU-206ENST00000465525 FRMD5Q7Z6J6 570 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 TRIM59Q8IWR1 403 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 TMEM199Q8N511 208 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 TMEM174Q8WUU8 243 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 CCDC127Q96BQ5 260 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 FAM84AQ96KN4 292 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 FBXL18Q96ME1 805 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 MKNK1Q9BUB5 465 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 XPO4Q9C0E2 1151 aaKnown RBP18.73■□□□□ 0.59
PTPRU-206ENST00000465525 CITO14578 2027 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 ZNF233A6NK53 670 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 UBASH3AP57075 661 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 CYP24A1Q07973 514 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 MIIPQ5JXC2 388 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 FAM43BQ6ZT52 329 aaPredicted RBP18.73■□□□□ 0.59
PTPRU-206ENST00000465525 FAM212AQ96EL1 285 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 APOL6Q9BWW8 343 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 IFIH1Q9BYX4 1025 aaKnown RBP18.73■□□□□ 0.59
PTPRU-206ENST00000465525 NXF3Q9H4D5 531 aaKnown RBP18.73■□□□□ 0.59
PTPRU-206ENST00000465525 MMRN2Q9H8L6 949 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 INTS13Q9NVM9 706 aa18.73■□□□□ 0.59
PTPRU-206ENST00000465525 RBAKQ9NYW8 714 aaPredicted RBP18.73■□□□□ 0.59
PTPRU-206ENST00000465525 KIAA0391O15091 583 aaKnown RBP18.72■□□□□ 0.59
PTPRU-206ENST00000465525 ADCY5O95622 1261 aa18.72■□□□□ 0.59
PTPRU-206ENST00000465525 STAG3L1P0CL83 205 aa18.72■□□□□ 0.59
PTPRU-206ENST00000465525 KRT13P13646 458 aa18.72■□□□□ 0.59
PTPRU-206ENST00000465525 MARSP56192 900 aaKnown RBP18.72■□□□□ 0.59
PTPRU-206ENST00000465525 DCAF4L1Q3SXM0 396 aa18.72■□□□□ 0.59
PTPRU-206ENST00000465525 SARM1Q6SZW1 724 aa18.72■□□□□ 0.59
PTPRU-206ENST00000465525 POP1Q99575 1024 aaKnown RBP18.72■□□□□ 0.59
PTPRU-206ENST00000465525 TRIM6Q9C030 488 aaPredicted RBP18.72■□□□□ 0.59
PTPRU-206ENST00000465525 METTL14Q9HCE5 456 aaKnown RBP18.72■□□□□ 0.59
PTPRU-206ENST00000465525 CPSF3Q9UKF6 684 aaKnown RBP18.72■□□□□ 0.59
PTPRU-206ENST00000465525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.72■□□□□ 0.59
PTPRU-206ENST00000465525 NR2E3Q9Y5X4 410 aa18.72■□□□□ 0.59
PTPRU-206ENST00000465525 TEX33O43247 280 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 LDHAP00338 332 aaKnown RBP18.71■□□□□ 0.59
PTPRU-206ENST00000465525 CXCL10P02778 98 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 CXCL8P10145 99 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 VAMP7P51809 220 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 ZNF75DP51815 510 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 BFSP1Q12934 665 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 MAN2A1Q16706 1144 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 TCTN1Q2MV58 587 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 DEFB128Q7Z7B8 93 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 MFSD14AQ96MC6 490 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 KIAA1586Q9HCI6 787 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 PDE11AQ9HCR9 933 aa18.71■□□□□ 0.59
PTPRU-206ENST00000465525 TOPORSQ9NS56 1045 aaPredicted RBP18.71■□□□□ 0.59
PTPRU-206ENST00000465525 MEFVO15553 781 aaPredicted RBP18.7■□□□□ 0.58
PTPRU-206ENST00000465525 DLATP10515 647 aaKnown RBP18.7■□□□□ 0.58
PTPRU-206ENST00000465525 ZSCAN20P17040 1043 aaPredicted RBP18.7■□□□□ 0.58
PTPRU-206ENST00000465525 RGS19P49795 217 aa18.7■□□□□ 0.58
PTPRU-206ENST00000465525 DSC3Q14574 896 aa18.7■□□□□ 0.58
PTPRU-206ENST00000465525 ENOX2Q16206 610 aaKnown RBP18.7■□□□□ 0.58
PTPRU-206ENST00000465525 VWA3BQ502W6 1294 aa18.7■□□□□ 0.58
PTPRU-206ENST00000465525 PLEKHG4Q58EX7 1191 aa18.7■□□□□ 0.58
PTPRU-206ENST00000465525 LMBRD2Q68DH5 695 aaPredicted RBP18.7■□□□□ 0.58
PTPRU-206ENST00000465525 INTS8Q75QN2 995 aaKnown RBP18.7■□□□□ 0.58
PTPRU-206ENST00000465525 RPUSD2Q8IZ73 545 aaKnown RBP18.7■□□□□ 0.58
PTPRU-206ENST00000465525 SLC35C1Q96A29 364 aa18.7■□□□□ 0.58
PTPRU-206ENST00000465525 ADAM2Q99965 735 aa18.7■□□□□ 0.58
PTPRU-206ENST00000465525 CHST12Q9NRB3 414 aa18.7■□□□□ 0.58
PTPRU-206ENST00000465525 SNTG2Q9NY99 539 aa18.7■□□□□ 0.58
PTPRU-206ENST00000465525 RALGAPA2Q2PPJ7 1873 aa18.7■□□□□ 0.58
PTPRU-206ENST00000465525 A0A1B0GTH6 734 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 LRRC10BA6NIK2 292 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 MAPK13O15264 365 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 AKAP5P24588 427 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 C1orf220Q5T0J3 134 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 APBB1IPQ7Z5R6 666 aaPredicted RBP18.69■□□□□ 0.58
PTPRU-206ENST00000465525 SMG8Q8ND04 991 aaKnown RBP18.69■□□□□ 0.58
PTPRU-206ENST00000465525 DBF4BQ8NFT6 615 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 SEPT8Q92599 483 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 APBB2Q92870 758 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 CXCL16Q9H2A7 254 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 RNF39Q9H2S5 420 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 NDST4Q9H3R1 872 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 RTN4Q9NQC3 1192 aaKnown RBP18.69■□□□□ 0.58
PTPRU-206ENST00000465525 RNF19AQ9NV58 838 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 IPPQ9Y573 584 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 PCDHB2Q9Y5E7 798 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 LRRIQ3A6PVS8 624 aaPredicted RBP18.69■□□□□ 0.58
PTPRU-206ENST00000465525 LGALS16A8MUM7 142 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 TPM2P07951 284 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 CLTAP09496 248 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 CSF2RAP15509 400 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 SYN1P17600 705 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 GRM5P41594 1212 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 KCNH2Q12809 1159 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 BRSK2Q8IWQ3 736 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 LINC01599Q8WXQ3 324 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms