RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PABPC1LQ4VXU2 614 aaKnown RBP16.75■□□□□ 0.27
HDAC6-214ENST00000465269 TMTC2Q8N394 836 aa16.75■□□□□ 0.27
HDAC6-214ENST00000465269 EXOC6Q8TAG9 804 aa16.75■□□□□ 0.27
HDAC6-214ENST00000465269 COL26A1Q96A83 441 aa16.75■□□□□ 0.27
HDAC6-214ENST00000465269 TMEM143Q96AN5 459 aa16.75■□□□□ 0.27
HDAC6-214ENST00000465269 TCEANC2Q96MN5 208 aa16.75■□□□□ 0.27
HDAC6-214ENST00000465269 KLK14Q9P0G3 267 aa16.75■□□□□ 0.27
HDAC6-214ENST00000465269 ADAM28Q9UKQ2 775 aa16.75■□□□□ 0.27
HDAC6-214ENST00000465269 MRPS17Q9Y2R5 130 aaKnown RBP16.75■□□□□ 0.27
HDAC6-214ENST00000465269 COL4A3BPQ9Y5P4 624 aa16.75■□□□□ 0.27
HDAC6-214ENST00000465269 AXIN1O15169 862 aa16.74■□□□□ 0.27
HDAC6-214ENST00000465269 TOP3BO95985 862 aaKnown RBP16.74■□□□□ 0.27
HDAC6-214ENST00000465269 HNRNPA1P09651 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
HDAC6-214ENST00000465269 CEBPBP17676 345 aa16.74■□□□□ 0.27
HDAC6-214ENST00000465269 AKAP5P24588 427 aa16.74■□□□□ 0.27
HDAC6-214ENST00000465269 CDC42EP1Q00587 391 aa16.74■□□□□ 0.27
HDAC6-214ENST00000465269 XKR3Q5GH77 459 aa16.74■□□□□ 0.27
HDAC6-214ENST00000465269 ANO5Q75V66 913 aa16.74■□□□□ 0.27
HDAC6-214ENST00000465269 CEP57Q86XR8 500 aa16.74■□□□□ 0.27
HDAC6-214ENST00000465269 PRPF31Q8WWY3 499 aaKnown RBP16.74■□□□□ 0.27
HDAC6-214ENST00000465269 DDX1Q92499 740 aaKnown RBP16.74■□□□□ 0.27
HDAC6-214ENST00000465269 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
HDAC6-214ENST00000465269 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
HDAC6-214ENST00000465269 BRPF3Q9ULD4 1205 aa16.74■□□□□ 0.27
HDAC6-214ENST00000465269 MRPS23Q9Y3D9 190 aaKnown RBP16.74■□□□□ 0.27
HDAC6-214ENST00000465269 FREM2Q5SZK8 3169 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 IGSF10Q6WRI0 2623 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 GIPC1O14908 333 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 SGSM2O43147 1006 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 ECI2O75521 394 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 KCNK5O95279 499 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 FCARP24071 287 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 CXCL12P48061 93 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 CCR3P51677 355 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 RTN1Q16799 776 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 AXDND1Q5T1B0 1012 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-214ENST00000465269 LRCH2Q5VUJ6 765 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 APOA5Q6Q788 366 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 MIER3Q7Z3K6 550 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 CDR2LQ86X02 465 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-214ENST00000465269 GSTCDQ8NEC7 633 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 ARRDC1-AS1Q9H2J1 176 aa16.73■□□□□ 0.27
HDAC6-214ENST00000465269 XYLBO75191 536 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 NR1I2O75469 434 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 TADA2AO75478 443 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 ZIC2O95409 532 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-214ENST00000465269 C1RP00736 705 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 IGFBP6P24592 240 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-214ENST00000465269 CDC27P30260 824 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 CIITAP33076 1130 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 JAK3P52333 1124 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 PSMD5Q16401 504 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 STPG1Q5TH74 334 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 PSAPL1Q6NUJ1 521 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 Q6ZS52 159 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 REXO1Q8N1G1 1221 aaKnown RBP16.72■□□□□ 0.27
HDAC6-214ENST00000465269 LNX1Q8TBB1 728 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-214ENST00000465269 FAM3CQ92520 227 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 SLC5A5Q92911 643 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 MTA3Q9BTC8 594 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 TEKT3Q9BXF9 490 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 BRD9Q9H8M2 597 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 COL4A2P08572 1712 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 TICRRQ7Z2Z1 1910 aa16.72■□□□□ 0.27
HDAC6-214ENST00000465269 K7ESF4 209 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 TSPAN1O60635 241 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 SFNP31947 248 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 LAMTOR4Q0VGL1 99 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 WDR44Q5JSH3 913 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 TTC22Q5TAA0 569 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 FAM171A1Q5VUB5 890 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 CEP68Q76N32 757 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 SGMS1Q86VZ5 419 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 TCEAL4Q96EI5 215 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 TTPALQ9BTX7 342 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 CXCL16Q9H2A7 254 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 UBN1Q9NPG3 1134 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 PIAS3Q9Y6X2 628 aa16.71■□□□□ 0.27
HDAC6-214ENST00000465269 GREB1Q4ZG55 1949 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 CASTOR2A6NHX0 329 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 SLC27A2O14975 620 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 KIF4AO95239 1232 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 RHOP08100 348 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 CHRNB1P11230 501 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 RING1Q06587 406 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 FOXC1Q12948 553 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 PPP2R5DQ14738 602 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 FAM78AQ5JUQ0 283 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 SRGAP1Q7Z6B7 1085 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 C12orf50Q8NA57 414 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-214ENST00000465269 RNF149Q8NC42 400 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 RIT2Q99578 217 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 GLT8D2Q9H1C3 349 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 RWDD1Q9H446 243 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-214ENST00000465269 RBM28Q9NW13 759 aaKnown RBP16.7■□□□□ 0.26
HDAC6-214ENST00000465269 ASH1LQ9NR48 2969 aaKnown RBP16.7■□□□□ 0.26
HDAC6-214ENST00000465269 NCANO14594 1321 aa16.7■□□□□ 0.26
HDAC6-214ENST00000465269 HELZ2Q9BYK8 2649 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms