RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 GOLGA5Q8TBA6 731 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 ZNF507Q8TCN5 953 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 LPPQ93052 612 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 GUCD1Q96NT3 240 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 GSDMAQ96QA5 445 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 RPS6KC1Q96S38 1066 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 C17orf80Q9BSJ5 609 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 HES2Q9Y543 173 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 CITO14578 2027 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 MEIS3P2A8K0S8 358 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 GOLGA6L22H0YM25 854 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 FAM189A1O60320 539 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 NR1I2O75469 434 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 SMC2O95347 1197 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 RPN1P04843 607 aaKnown RBP14.97□□□□□ -0.01
LIMD1-203ENST00000465039 KCNE1P15382 129 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 CASP5P51878 434 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 PDE12Q6L8Q7 609 aaKnown RBP14.97□□□□□ -0.01
LIMD1-203ENST00000465039 KCNT2Q6UVM3 1135 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 LRRC55Q6ZSA7 311 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 CDR2LQ86X02 465 aaPredicted RBP14.97□□□□□ -0.01
LIMD1-203ENST00000465039 COLGALT1Q8NBJ5 622 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 GSTCDQ8NEC7 633 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 ARNTL2Q8WYA1 636 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 ACAP3Q96P50 834 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 GAD1Q99259 594 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 CDX2Q99626 313 aaPredicted RBP14.97□□□□□ -0.01
LIMD1-203ENST00000465039 GBP3Q9H0R5 595 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 BLZF1Q9H2G9 400 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 SLC38A7Q9NVC3 462 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 CNTN3Q9P232 1028 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 STXBP5LQ9Y2K9 1186 aa14.97□□□□□ -0.01
LIMD1-203ENST00000465039 TDRD15B5MCY1 1934 aaKnown RBP14.96□□□□□ -0.01
LIMD1-203ENST00000465039 FSD2A1L4K1 749 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 LDHAP00338 332 aaKnown RBP14.96□□□□□ -0.01
LIMD1-203ENST00000465039 ADRB2P07550 413 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 MYBP10242 640 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 TUSC3Q13454 348 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 SLC39A4Q6P5W5 647 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 ALKAL1Q6UXT8 129 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 Q7L0L9 218 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 C12orf56Q8IXR9 622 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 GRAMD1CQ8IYS0 662 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 SYCP3Q8IZU3 236 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 SNX27Q96L92 541 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 ZFP42Q96MM3 310 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 UROC1Q96N76 676 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 FAM193BQ96PV7 902 aaPredicted RBP14.96□□□□□ -0.01
LIMD1-203ENST00000465039 MSTO1Q9BUK6 570 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 PRDM12Q9H4Q4 367 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 KIAA1586Q9HCI6 787 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 SNTG2Q9NY99 539 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 SPG21Q9NZD8 308 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 PARP2Q9UGN5 583 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 INPP5FQ9Y2H2 1132 aa14.96□□□□□ -0.01
LIMD1-203ENST00000465039 LPXNO60711 386 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 THP07101 528 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 IBSPP21815 317 aaPredicted RBP14.95□□□□□ -0.02
LIMD1-203ENST00000465039 AKAP5P24588 427 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 SCNN1GP51170 649 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 BCAR1P56945 870 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 KRT17Q04695 432 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 GPM6BQ13491 265 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 KMT5BQ4FZB7 885 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 TIGD5Q53EQ6 642 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 COBLL1Q53SF7 1204 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 SPOUT1Q5T280 376 aaKnown RBP14.95□□□□□ -0.02
LIMD1-203ENST00000465039 NT5DC4Q86YG4 428 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 COLGALT2Q8IYK4 626 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 GPR65Q8IYL9 337 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 SLC39A11Q8N1S5 342 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 SCFD1Q8WVM8 642 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 MRPL38Q96DV4 380 aaKnown RBP14.95□□□□□ -0.02
LIMD1-203ENST00000465039 APOL6Q9BWW8 343 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 NRDE2Q9H7Z3 1164 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 TBC1D7Q9P0N9 293 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 PUF60Q9UHX1 559 aaKnown RBP14.95□□□□□ -0.02
LIMD1-203ENST00000465039 CPSF3Q9UKF6 684 aaKnown RBP14.95□□□□□ -0.02
LIMD1-203ENST00000465039 AGO2Q9UKV8 859 aaKnown RBP14.95□□□□□ -0.02
LIMD1-203ENST00000465039 PLAGL2Q9UPG8 496 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 USP20Q9Y2K6 914 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 DERAQ9Y315 318 aa14.95□□□□□ -0.02
LIMD1-203ENST00000465039 TTC26A0AVF1 554 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 TMEM189-UBE2V1I3L0A0 370 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 PTGESO14684 152 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 XPOTO43592 962 aaKnown RBP14.94□□□□□ -0.02
LIMD1-203ENST00000465039 ZC3H11AO75152 810 aaKnown RBP eCLIP14.94□□□□□ -0.02
LIMD1-203ENST00000465039 FGF18O76093 207 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 FOSL2P15408 326 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 ADSSP30520 456 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 PPP1R2P41236 205 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 MATR3P43243 847 aaKnown RBP eCLIP14.94□□□□□ -0.02
LIMD1-203ENST00000465039 MYBPC2Q14324 1141 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 KNOP1Q1ED39 458 aaKnown RBP14.94□□□□□ -0.02
LIMD1-203ENST00000465039 ZBTB33Q86T24 672 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 THNSL1Q8IYQ7 743 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 GUF1Q8N442 669 aaKnown RBP14.94□□□□□ -0.02
LIMD1-203ENST00000465039 CEP120Q8N960 986 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms