RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MIOSQ9NXC5 875 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 EXOC7Q9UPT5 735 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 ANKRD63C9JTQ0 380 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 ZC3H11AO75152 810 aaKnown RBP eCLIP15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 GADD45BO75293 160 aaPredicted RBP15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 DDHD2O94830 711 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 PRPF6O94906 941 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 POU3F3P20264 500 aaPredicted RBP15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 ALDH7A1P49419 539 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 SCNN1GP51170 649 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 YARSP54577 528 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 BCAR1P56945 870 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 OSTNP61366 133 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 KCNA1Q09470 495 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 FAM26FQ5R3K3 315 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 SLC39A4Q6P5W5 647 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 ZNF280BQ86YH2 543 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 THNSL1Q8IYQ7 743 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 ZNF558Q96NG5 402 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 ACAP3Q96P50 834 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 RPS6KC1Q96S38 1066 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 HAPLN2Q9GZV7 340 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 GBP3Q9H0R5 595 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 PLAGL2Q9UPG8 496 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 STXBP5LQ9Y2K9 1186 aa15.87■□□□□ 0.13
SQSTM1-205ENST00000464493 A0A0B4J269 797 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 CARNS1A5YM72 827 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 KLRC4O43908 158 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 ALDH2P05091 517 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 GALTP07902 379 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 PBX3P40426 434 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 SLFN12LQ6IEE8 588 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 SYCP3Q8IZU3 236 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 GLIS3Q8NEA6 775 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 SPPL3Q8TCT6 385 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 IKZF4Q9H2S9 585 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 TMEM206Q9H813 350 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 ALG13Q9NP73 1137 aaKnown RBP15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 TOPORSQ9NS56 1045 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 SPG21Q9NZD8 308 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 LMCD1Q9NZU5 365 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 DNAJB4Q9UDY4 337 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 MTCH2Q9Y6C9 303 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 STYXL1Q9Y6J8 313 aa15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 TDRD15B5MCY1 1934 aaKnown RBP15.86■□□□□ 0.13
SQSTM1-205ENST00000464493 GRM6O15303 877 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 EIF3DO15371 548 aaKnown RBP eCLIP15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 NR1I2O75469 434 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 FGF18O76093 207 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 RPN1P04843 607 aaKnown RBP15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 ITGB1P05556 798 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 THP07101 528 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 PRR29P0C7W0 189 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 PPM1AP35813 382 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 GRIK3Q13003 919 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 PSMD2Q13200 908 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 KYAT1Q16773 422 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 PTPROQ16827 1216 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 KMT5BQ4FZB7 885 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 SEZ6Q53EL9 994 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 ALKAL1Q6UXT8 129 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 CLEC17AQ6ZS10 378 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 EPM2AIP1Q7L775 607 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 ZNF507Q8TCN5 953 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 TIGD1Q96MW7 591 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 TMEM175Q9BSA9 504 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 MSTO1Q9BUK6 570 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 LMAN2LQ9H0V9 348 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 CXCL16Q9H2A7 254 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 SLC39A2Q9NP94 309 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 EXOC1Q9NV70 894 aa15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 COL4A4P53420 1690 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-205ENST00000464493 TRIP11Q15643 1979 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 TISP43B9A030 160 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 NT5C1B-RDH14C9J2C7 533 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 PTGESO14684 152 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 OGTO15294 1046 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 B4GALT3O60512 393 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 PRPF40AO75400 957 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 SLC11A1P49279 550 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 UBE2HP62256 183 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 PLCB3Q01970 1234 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 KRT17Q04695 432 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 DSC1Q08554 894 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 DPYDQ12882 1025 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 POSTNQ15063 836 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 COLGALT2Q8IYK4 626 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 SLC39A11Q8N1S5 342 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 POMGNT1Q8WZA1 660 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 CCDC47Q96A33 483 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 MRPL38Q96DV4 380 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 FAN1Q9Y2M0 1017 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 CITO14578 2027 aa15.84■□□□□ 0.13
SQSTM1-205ENST00000464493 COL6A3P12111 3177 aa15.83■□□□□ 0.13
SQSTM1-205ENST00000464493 PRRC2BQ5JSZ5 2229 aaKnown RBP15.83■□□□□ 0.13
SQSTM1-205ENST00000464493 SMIM28A0A1B0GU29 152 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 NRP1O14786 923 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 FAM189A1O60320 539 aa15.83■□□□□ 0.12
SQSTM1-205ENST00000464493 CLTAP09496 248 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms