RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 MRGPRX4Q96LA9 322 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 SAMD11Q96NU1 681 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 GPHA2Q96T91 129 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 SARGQ9BW04 601 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 B3GNT5Q9BYG0 378 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 C12orf65Q9H3J6 166 aaKnown RBP4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 SEC61A2Q9H9S3 476 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 CALCOCO1Q9P1Z2 691 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 AJAP1Q9UKB5 411 aaPredicted RBP4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 OAZ3Q9UMX2 235 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 PCDHB1Q9Y5F3 818 aa4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 MYBBP1AQ9BQG0 1328 aaKnown RBP4.67□□□□□ -1.66
HMGXB4-205ENST00000464480 A0A1W2PRX2 142 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 TPP1O14773 563 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 CDC14BO60729 498 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 SASH1O94885 1247 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 CNOT4O95628 575 aaKnown RBP4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 ZBED1O96006 694 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 TRIM27P14373 513 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 SYN1P17600 705 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 DDCP20711 480 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 HTR1BP28222 390 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 CASRP41180 1078 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 FLT3LGP49771 235 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 MAP2K6P52564 334 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 HK3P52790 923 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 PPP2CBP62714 309 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 PPP2CAP67775 309 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 APBA1Q02410 837 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 TARDBPQ13148 414 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 NOGQ13253 232 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 HDAC1Q13547 482 aaPredicted RBP4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 CCDC149Q6ZUS6 474 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 ZNF572Q7Z3I7 529 aaPredicted RBP4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 REPS2Q8NFH8 660 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 KLHDC4Q8TBB5 520 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 MDM1Q8TC05 714 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 ARL8AQ96BM9 186 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 NEIL1Q96FI4 390 aaPredicted RBP4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 LMF1Q96S06 567 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 LDAHQ9H6V9 325 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 FEZ2Q9UHY8 353 aaPredicted RBP4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 NR2E3Q9Y5X4 410 aa4.66□□□□□ -1.66
HMGXB4-205ENST00000464480 CAPN8A6NHC0 703 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 LAMTOR5O43504 91 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 HRGP04196 525 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 NBPF7P0C2Y1 421 aaPredicted RBP4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 PHKG2P15735 406 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 RHCEP18577 417 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 CR2P20023 1033 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 CFPP27918 469 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 CACNB3P54284 484 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 EPHB4P54760 987 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 FAM193AP78312 1265 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 RHDQ02161 417 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 PTH1RQ03431 593 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 TLE1Q04724 770 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 MTM1Q13496 603 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 ACAP1Q15027 740 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 SAFBQ15424 915 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 MAP9Q49MG5 647 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 ANO6Q4KMQ2 910 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 ADGRE4PQ86SQ3 457 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 FAM43AQ8N2R8 423 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 IFI44Q8TCB0 444 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 FBXO41Q8TF61 875 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 LRRC37BQ96QE4 947 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 DPYSL5Q9BPU6 564 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 TCF25Q9BQ70 676 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 ENKD1Q9H0I2 346 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 EPC1Q9H2F5 836 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 NELFAQ9H3P2 528 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 DDX21Q9NR30 783 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 LMBRD1Q9NUN5 540 aa4.65□□□□□ -1.67
HMGXB4-205ENST00000464480 UBE2QL1A1L167 161 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 A6NNZ2 444 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 MATN2O00339 956 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 TRIM13O60858 407 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 MAP4K4O95819 1239 aaPredicted RBP4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 AMY1AP04745 511 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 FTH1P19P0C7X4 201 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 ZSCAN22P10073 491 aaPredicted RBP4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 RAP2AP10114 183 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 SMARCA1P28370 1054 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 RPS19P39019 145 aaKnown RBP4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 AGFG1P52594 562 aaKnown RBP4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 USP14P54578 494 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 CTXN1P60606 82 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 RAB1AP62820 205 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 GPSM2P81274 684 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 CREMQ03060 361 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 MRPL49Q13405 166 aaKnown RBP4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 PICALMQ13492 652 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 SAFB2Q14151 953 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 KHDC1Q4VXA5 237 aaKnown RBP4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 COBLL1Q53SF7 1204 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 FAM47AQ5JRC9 791 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 SLFN13Q68D06 897 aa4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 DARS2Q6PI48 645 aaKnown RBP4.64□□□□□ -1.67
HMGXB4-205ENST00000464480 NPNTQ6UXI9 565 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms