RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 MIGA2Q7L4E1 593 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 PALM2Q8IXS6 379 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 MYO1HQ8N1T3 1032 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 CYFIP2Q96F07 1278 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 C8orf48Q96LL4 319 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 TEKT5Q96M29 485 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 SLC2A13Q96QE2 648 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 CPPED1Q9BRF8 314 aaPredicted RBP5.39□□□□□ -1.55
CLK1-208ENST00000464454 RHOBTB2Q9BYZ6 727 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 MANSC1Q9H8J5 431 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 DMRT3Q9NQL9 472 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 LANCL2Q9NS86 450 aa5.39□□□□□ -1.55
CLK1-208ENST00000464454 PNMA8BQ9ULN7 279 aaPredicted RBP5.39□□□□□ -1.55
CLK1-208ENST00000464454 GOLGA6L6A8MZA4 724 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 PF4V1P10720 104 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 IL2RBP14784 551 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 MAN2A2P49641 1150 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 FLT3LGP49771 235 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 PTH1RQ03431 593 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 SP140Q13342 867 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 FAM102BQ5T8I3 360 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 TCEAL8Q8IYN2 117 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 CMTR2Q8IYT2 770 aaKnown RBP5.38□□□□□ -1.55
CLK1-208ENST00000464454 PQLC1Q8N2U9 271 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 LILRA3Q8N6C8 439 aaPredicted RBP5.38□□□□□ -1.55
CLK1-208ENST00000464454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.38□□□□□ -1.55
CLK1-208ENST00000464454 MDM1Q8TC05 714 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 ATXN2LQ8WWM7 1075 aaKnown RBP5.38□□□□□ -1.55
CLK1-208ENST00000464454 HOXB13Q92826 284 aaPredicted RBP5.38□□□□□ -1.55
CLK1-208ENST00000464454 HSPBAP1Q96EW2 488 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 C7orf25Q9BPX7 421 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 MOCS1Q9NZB8 636 aa5.38□□□□□ -1.55
CLK1-208ENST00000464454 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 GOLGA6CA6NDK9 693 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 GOLGA6BA6NDN3 693 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 PRR5-ARHGAP8B1AHC4 643 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 KIF3BO15066 747 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 TEX33O43247 280 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 STC2O76061 302 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 IL33O95760 270 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 GOLGA6DP0CG33 693 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 C5AR1P21730 350 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 CYP2C19P33261 490 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 PTPN7P35236 360 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 SREBF1P36956 1147 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 ADKP55263 362 aaKnown RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 CNGB1Q14028 1251 aaPredicted RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 CDSNQ15517 529 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 FAM214AQ32MH5 1076 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 PRAMEF14Q5SWL7 426 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 SPTY2D1Q68D10 685 aaPredicted RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 NXNQ6DKJ4 435 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 CXorf57Q6NSI4 855 aaKnown RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 Q6ZVL8 140 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 ZNF572Q7Z3I7 529 aaPredicted RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 ELOA2Q8IYF1 753 aaPredicted RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 TRMT2AQ8IZ69 625 aaKnown RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 PPM1NQ8N819 430 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 MB21D1Q8N884 522 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 CASKIN2Q8WXE0 1202 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 HDAC10Q969S8 669 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 NUP88Q99567 741 aaPredicted RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 GPR87Q9BY21 358 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 SENP6Q9GZR1 1112 aaPredicted RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 TMEM140Q9NV12 185 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 GOLGA6AQ9NYA3 693 aa5.37□□□□□ -1.55
CLK1-208ENST00000464454 NOB1Q9ULX3 412 aaKnown RBP5.37□□□□□ -1.55
CLK1-208ENST00000464454 PJA2O43164 708 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 RPLP2P05387 115 aaKnown RBP5.36□□□□□ -1.55
CLK1-208ENST00000464454 MGAT1P26572 445 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 MLC1Q15049 377 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 FAM47AQ5JRC9 791 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 SPDYAQ5MJ70 313 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 NAIF1Q69YI7 327 aaPredicted RBP5.36□□□□□ -1.55
CLK1-208ENST00000464454 HTR3DQ70Z44 454 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 MIER2Q8N344 545 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 NRG4Q8WWG1 115 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 CSRNP2Q9H175 543 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 TUBD1Q9UJT1 453 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 INTUQ9ULD6 942 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 MYRFQ9Y2G1 1151 aa5.36□□□□□ -1.55
CLK1-208ENST00000464454 ZMYM3Q14202 1370 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 ADCY6O43306 1168 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 SNRPA1P09661 255 aaKnown RBP5.35□□□□□ -1.55
CLK1-208ENST00000464454 ATF3P18847 181 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 AKAP5P24588 427 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 RABGGTBP53611 331 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 KIF23Q02241 960 aaPredicted RBP5.35□□□□□ -1.55
CLK1-208ENST00000464454 GTF2H3Q13889 308 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 ATP2B3Q16720 1220 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 USP39Q53GS9 565 aaKnown RBP5.35□□□□□ -1.55
CLK1-208ENST00000464454 PPP4R3AQ6IN85 833 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 DRICH1Q6PGQ1 229 aaPredicted RBP5.35□□□□□ -1.55
CLK1-208ENST00000464454 C14orf80Q86SX3 495 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 TPH2Q8IWU9 490 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 MAGEB6Q8N7X4 407 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 OR52N2Q8NGI0 321 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 TTC8Q8TAM2 541 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 SH3RF3Q8TEJ3 882 aaPredicted RBP5.35□□□□□ -1.55
CLK1-208ENST00000464454 MNTQ99583 582 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms