RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 DNAJC12Q9UKB3 198 aa13.1□□□□□ -0.31
SEC61A1-203ENST00000464451 HPCAL4Q9UM19 191 aa13.1□□□□□ -0.31
SEC61A1-203ENST00000464451 KIAA1217Q5T5P2 1943 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 N4BP1O75113 896 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 STAM2O75886 525 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 GH1P01241 217 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 ASGR1P07306 291 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 MYBL2P10244 700 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 TNFRSF8P28908 595 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 SFNP31947 248 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 NOP2P46087 812 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 DRAP1Q14919 205 aaPredicted RBP13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 RPS6KA1Q15418 735 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 CXCL17Q6UXB2 119 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 CYFIP1Q7L576 1253 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 MAEAQ7L5Y9 396 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 KLHDC9Q8NEP7 349 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 HDAC7Q8WUI4 952 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 UPF3AQ9H1J1 476 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 C11orf49Q9H6J7 331 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 EHD2Q9NZN4 543 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 VPS18Q9P253 973 aa13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 DMGDHQ9UI17 866 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-203ENST00000464451 WDR64B1ANS9 1081 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 DDX3XO00571 662 aaKnown RBP eCLIP13.08□□□□□ -0.323e-15■■■■■ 28.1
SEC61A1-203ENST00000464451 P4HA2O15460 535 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 MYL3P08590 195 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 TRIM49P0CI25 452 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 TRIM49CP0CI26 452 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 ACLYP53396 1101 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 NPEPPSP55786 919 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 PSMC5P62195 406 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 KRT76Q01546 638 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 CETN1Q12798 172 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 CCSAPQ6IQ19 270 aaPredicted RBP13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 NECAB2Q7Z6G3 386 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 UBE2Q1Q7Z7E8 422 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 ANKLE1Q8NAG6 615 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 SLC30A5Q8TAD4 765 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 PBKQ96KB5 322 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 TCEAL9Q9UHQ7 104 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 MYH10P35580 1976 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 MAPK13O15264 365 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 KIF4AO95239 1232 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 ICAM3P32942 547 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 GTF2BQ00403 316 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 HSDL1Q3SXM5 330 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 CELF3Q5SZQ8 465 aaKnown RBP13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 EMBQ6PCB8 327 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 KCNV1Q6PIU1 500 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 GSPT2Q8IYD1 628 aaKnown RBP13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 RDM1Q8NG50 284 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 VTI1AQ96AJ9 217 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 GPRASP2Q96D09 838 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 SPATA33Q96N06 139 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 ANKEF1Q9NU02 776 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 FAN1Q9Y2M0 1017 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 Q9Y3F1 56 aa13.08□□□□□ -0.32
SEC61A1-203ENST00000464451 A0A1W2PQ45 241 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 A0A1W2PQY0 241 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 CCDC66A2RUB6 948 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 MAFGO15525 162 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 TGFB3P10600 412 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 COL6A1P12109 1028 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 DNA2P51530 1060 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 EPHB4P54760 987 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 GYS2P54840 703 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 SLC7A5Q01650 507 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 HAUS6Q7Z4H7 955 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 SLFN11Q7Z7L1 901 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 IFT20Q8IY31 132 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 XXYLT1Q8NBI6 393 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 GPR88Q9GZN0 384 aa13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 PACSIN2Q9UNF0 486 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-203ENST00000464451 KCNK3O14649 394 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 BACH1O14867 736 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 MMP3P08254 477 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 KCNA2P16389 499 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 CPT1AP50416 773 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 VAMP7P51809 220 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 TNNC1P63316 161 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 LAMC2Q13753 1193 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 PCSK9Q8NBP7 692 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 LMO3Q8TAP4 145 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 LNX1Q8TBB1 728 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 GDAP1L1Q96MZ0 367 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 SYT11Q9BT88 431 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 DOCK5Q9H7D0 1870 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 HSPBP1Q9NZL4 362 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 PHF24Q9UPV7 400 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 ERICH4A6NGS2 130 aa13.06□□□□□ -0.32
SEC61A1-203ENST00000464451 A6NJR5 290 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms