RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 MROH6A6NGR9 719 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 K7ESM1 405 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 FGFR1P11362 822 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 CCL15Q16663 113 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 LRIT3Q3SXY7 679 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 HHIPL2Q6UWX4 724 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 LBX2Q6XYB7 198 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 DEFB123Q8N688 67 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 DCAF4Q8WV16 495 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 SUCLG2Q96I99 432 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 CDC5LQ99459 802 aaKnown RBP4.45□□□□□ -1.7
SCFD1-204ENST00000463622 PCDH18Q9HCL0 1135 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 CD209Q9NNX6 404 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 TELO2Q9Y4R8 837 aa4.45□□□□□ -1.7
SCFD1-204ENST00000463622 BTBD19C9JJ37 291 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 KRIT1O00522 736 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 SGPL1O95470 568 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 IGHDP01880 384 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 CYP1A1P04798 512 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 CCL5P13501 91 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 ZNF28P17035 718 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 GRK2P25098 689 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 KLRK1P26718 216 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 HOXD10P28358 340 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 GRK3P35626 688 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 PSMC4P43686 418 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 RBM10P98175 930 aaKnown RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 IFRD2Q12894 506 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 GCKRQ14397 625 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 KIF22Q14807 665 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 CFAP100Q494V2 611 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 FOXB2Q5VYV0 432 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 OTOP3Q7RTS5 596 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 FTSJ3Q8IY81 847 aaKnown RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 ANKRD44Q8N8A2 993 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 ST13P5Q8NFI4 369 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 U2AF1L4Q8WU68 220 aaKnown RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 CLIC6Q96NY7 704 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 ANKRD2Q9GZV1 360 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 L2HGDHQ9H9P8 463 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 NGRNQ9NPE2 291 aaKnown RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 ZBTB40Q9NUA8 1239 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 RIPOR2Q9Y4F9 1068 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 LRRFIP2Q9Y608 721 aaKnown RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 RBBP6Q7Z6E9 1792 aaKnown RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 PNMA6EA0A0J9YXQ4 647 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 CLRN2A0PK11 232 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 IPO8O15397 1037 aaKnown RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 WDHD1O75717 1129 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 SOD2P04179 222 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 GNAT1P11488 350 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 CETPP11597 493 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 IL1R1P14778 569 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 EFEMP1Q12805 493 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 TUSC3Q13454 348 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 VGLL4Q14135 290 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 UBE3BQ7Z3V4 1068 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 LIMS2Q7Z4I7 341 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 PROSER1Q86XN7 944 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 ERO1BQ86YB8 467 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 CKAP2LQ8IYA6 745 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 LINS1Q8NG48 757 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 ZCCHC14Q8WYQ9 949 aaKnown RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 LCORQ96JN0 433 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 RBM15Q96T37 977 aaKnown RBP eCLIP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 SPATA9Q9BWV2 254 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 TANGO6Q9C0B7 1094 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 GREM2Q9H772 168 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 IPPKQ9H8X2 491 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 CWC25Q9NXE8 425 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 ZNF70Q9UC06 446 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 UTYO14607 1347 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 ZNF536O15090 1300 aa4.44□□□□□ -1.7
SCFD1-204ENST00000463622 DDX60Q8IY21 1712 aaKnown RBP4.44□□□□□ -1.7
SCFD1-204ENST00000463622 TAF1P21675 1872 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 GRM8O00222 908 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 B4GALT3O60512 393 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 CSF1RP07333 972 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 ADRB1P08588 477 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 GLRBP48167 497 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 SNAPC2Q13487 334 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 SPATS1Q496A3 300 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 FAM209AQ5JX71 171 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 FAM26FQ5R3K3 315 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 FAM109BQ6ICB4 259 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-204ENST00000463622 CEP85Q6P2H3 762 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 TRMT10BQ6PF06 316 aaKnown RBP4.43□□□□□ -1.7
SCFD1-204ENST00000463622 RSPO2Q6UXX9 243 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-204ENST00000463622 Q7L0L9 218 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 IFNL3Q8IZI9 196 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 LRRC47Q8N1G4 583 aaKnown RBP4.43□□□□□ -1.7
SCFD1-204ENST00000463622 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-204ENST00000463622 KLHDC4Q8TBB5 520 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 PHOSPHO1Q8TCT1 267 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 PLA2G12BQ9BX93 195 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 BICC1Q9H694 974 aaKnown RBP4.43□□□□□ -1.7
SCFD1-204ENST00000463622 JAG2Q9Y219 1238 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 ZDHHC9Q9Y397 364 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 UNC80Q8N2C7 3258 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms