RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 EFEMP2O95967 443 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 IDEP14735 1019 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 IRS1P35568 1242 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 ERVFC1P60507 584 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 UBE3AQ05086 875 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 ZNF568Q3ZCX4 644 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 HERC4Q5GLZ8 1057 aaPredicted RBP19.38■□□□□ 0.69
VPS52-214ENST00000463486 THNSL1Q8IYQ7 743 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 HACE1Q8IYU2 909 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 GLIS3Q8NEA6 775 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 HPS3Q969F9 1004 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 PAGE5Q96GU1 130 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 VN1R3Q9BXE9 311 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 LRRC27Q9C0I9 530 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 PRDM6Q9NQX0 595 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 TBC1D7Q9P0N9 293 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 LZTS1Q9Y250 596 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 GDAQ9Y2T3 454 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 STYXL1Q9Y6J8 313 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 TISP43B9A030 160 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 FSCN2O14926 492 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 MYBP10242 640 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 PPM1AP35813 382 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 ANP32AP39687 249 aaKnown RBP19.37■□□□□ 0.69
VPS52-214ENST00000463486 ALDH7A1P49419 539 aaKnown RBP19.37■□□□□ 0.69
VPS52-214ENST00000463486 AMPD3Q01432 767 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 RNASELQ05823 741 aaKnown RBP19.37■□□□□ 0.69
VPS52-214ENST00000463486 COASYQ13057 564 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 CUL4BQ13620 913 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 COL19A1Q14993 1142 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 PTPROQ16827 1216 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 PPM1EQ8WY54 764 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 MRPS27Q92552 414 aaKnown RBP19.37■□□□□ 0.69
VPS52-214ENST00000463486 HVCN1Q96D96 273 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 IGSF21Q96ID5 467 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 PYM1Q9BRP8 204 aaKnown RBP19.37■□□□□ 0.69
VPS52-214ENST00000463486 TMEM175Q9BSA9 504 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 GBP3Q9H0R5 595 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 BLZF1Q9H2G9 400 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 MRPL44Q9H9J2 332 aaKnown RBP19.37■□□□□ 0.69
VPS52-214ENST00000463486 PCDHGC5Q9Y5F6 944 aa19.37■□□□□ 0.69
VPS52-214ENST00000463486 VCANP13611 3396 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 A0A0B4J269 797 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 NRP1O14786 923 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 CLDN3O15551 220 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 KLRC4O43908 158 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 ADSSP30520 456 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 ABCD1P33897 745 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 HOXD13P35453 343 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 AFMP43652 599 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 NOLC1Q14978 699 aaKnown RBP eCLIP19.36■□□□□ 0.69
VPS52-214ENST00000463486 SEZ6Q53EL9 994 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 EPM2AIP1Q7L775 607 aaPredicted RBP19.36■□□□□ 0.69
VPS52-214ENST00000463486 CCDC65Q8IXS2 484 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 MICALL1Q8N3F8 863 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 FSIP1Q8NA03 581 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 PPP1R10Q96QC0 940 aaKnown RBP19.36■□□□□ 0.69
VPS52-214ENST00000463486 TCHPQ9BT92 498 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 MARCH5Q9NX47 278 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 ANKFY1Q9P2R3 1169 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 USP25Q9UHP3 1055 aa19.36■□□□□ 0.69
VPS52-214ENST00000463486 F8W810 466 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 HNRNPDLO14979 420 aaKnown RBP19.35■□□□□ 0.69
VPS52-214ENST00000463486 ALDH2P05091 517 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 SYKP43405 635 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 OSTNP61366 133 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 GRIK3Q13003 919 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 SLC10A6Q3KNW5 377 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 TCEAL5Q5H9L2 206 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 ZBTB41Q5SVQ8 909 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 L1TD1Q5T7N2 865 aaKnown RBP19.35■□□□□ 0.69
VPS52-214ENST00000463486 UNC13DQ70J99 1090 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 APBB1IPQ7Z5R6 666 aaPredicted RBP19.35■□□□□ 0.69
VPS52-214ENST00000463486 ENGASEQ8NFI3 743 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 ZMAT2Q96NC0 199 aaKnown RBP19.35■□□□□ 0.69
VPS52-214ENST00000463486 CHMP5Q9NZZ3 219 aa19.35■□□□□ 0.69
VPS52-214ENST00000463486 SMIM28A0A1B0GU29 152 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 PVALEFA0A1B0GWK0 134 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 ADRB2P07550 413 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 LIG4P49917 911 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 ASIC1P78348 528 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 SNW1Q13573 536 aaKnown RBP19.34■□□□□ 0.69
VPS52-214ENST00000463486 TIGD5Q53EQ6 642 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 CEP57L1Q8IYX8 460 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 SNX27Q96L92 541 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 PAAF1Q9BRP4 392 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 NSUN3Q9H649 340 aaKnown RBP19.34■□□□□ 0.69
VPS52-214ENST00000463486 TLR9Q9NR96 1032 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 CACNG4Q9UBN1 327 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 FAN1Q9Y2M0 1017 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 PCDHB13Q9Y5F0 798 aa19.34■□□□□ 0.69
VPS52-214ENST00000463486 TRIP11Q15643 1979 aa19.33■□□□□ 0.69
VPS52-214ENST00000463486 TDRD15B5MCY1 1934 aaKnown RBP19.33■□□□□ 0.69
VPS52-214ENST00000463486 CARNS1A5YM72 827 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 ZNF202O95125 648 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 GCNT3O95395 438 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 HARSP12081 509 aaKnown RBP19.33■□□□□ 0.68
VPS52-214ENST00000463486 KCNE1P15382 129 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 IGFBP6P24592 240 aaPredicted RBP19.33■□□□□ 0.68
VPS52-214ENST00000463486 TNFSF9P41273 254 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms