RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 DDX39AO00148 427 aaKnown RBP10.75□□□□□ -0.69
PTPRD-207ENST00000463477 TREHO43280 583 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 PARNO95453 639 aaKnown RBP10.75□□□□□ -0.69
PTPRD-207ENST00000463477 NR3C1P04150 777 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 RHOXF2BP0C7M4 288 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 EPB41P11171 864 aaKnown RBP10.75□□□□□ -0.69
PTPRD-207ENST00000463477 RFC2P35250 354 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 POLR2FP61218 127 aaKnown RBP10.75□□□□□ -0.69
PTPRD-207ENST00000463477 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
PTPRD-207ENST00000463477 MYBPC2Q14324 1141 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 NAB2Q15742 525 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 TRIM71Q2Q1W2 868 aaKnown RBP10.75□□□□□ -0.69
PTPRD-207ENST00000463477 CCDC70Q6NSX1 233 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 SWSAP1Q6NVH7 229 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 DHX38Q92620 1227 aaKnown RBP10.75□□□□□ -0.69
PTPRD-207ENST00000463477 BORCS6Q96GS4 357 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 UIMC1Q96RL1 719 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 RHOXF2Q9BQY4 288 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 ACBD3Q9H3P7 528 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 IL23AQ9NPF7 189 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 NLRC4Q9NPP4 1024 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 TCEAL9Q9UHQ7 104 aa10.75□□□□□ -0.69
PTPRD-207ENST00000463477 MAFBQ9Y5Q3 323 aaPredicted RBP10.75□□□□□ -0.69
PTPRD-207ENST00000463477 LTBP2Q14767 1821 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 MBLAC1A4D2B0 266 aaPredicted RBP10.74□□□□□ -0.69
PTPRD-207ENST00000463477 RRN3P2A6NIE6 340 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 WDR64B1ANS9 1081 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 GAS7O60861 476 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 GFPT2O94808 682 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 PSAPP07602 524 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 MYBP10242 640 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 CKBP12277 381 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 GUCY2CP25092 1073 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 MARK3P27448 753 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 OAS2P29728 719 aaKnown RBP10.74□□□□□ -0.69
PTPRD-207ENST00000463477 SFNP31947 248 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 PLCB4Q15147 1175 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 ASIC2Q16515 512 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 TDRD12Q587J7 1177 aaKnown RBP10.74□□□□□ -0.69
PTPRD-207ENST00000463477 TMEM240Q5SV17 173 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 C9orf50Q5SZB4 431 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 KLHDC7AQ5VTJ3 777 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 FAM160B1Q5W0V3 765 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 RPAINQ86UA6 219 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 FMNL3Q8IVF7 1028 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 CCDC60Q8IWA6 550 aaPredicted RBP10.74□□□□□ -0.69
PTPRD-207ENST00000463477 RDM1Q8NG50 284 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 GOLGA5Q8TBA6 731 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 VWCEQ96DN2 955 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 SCLYQ96I15 445 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 OSBPL9Q96SU4 736 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTPRD-207ENST00000463477 TEKT3Q9BXF9 490 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 ZHX3Q9H4I2 956 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 PARVGQ9HBI0 331 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 ZNF302Q9NR11 478 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 PSD3Q9NYI0 1048 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 PCDHGC5Q9Y5F6 944 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 ZMYM2Q9UBW7 1377 aa10.74□□□□□ -0.69
PTPRD-207ENST00000463477 RSPH10B2B2RC85 870 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 PDE2AO00408 941 aaPredicted RBP10.73□□□□□ -0.69
PTPRD-207ENST00000463477 CES2O00748 559 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 BACH1O14867 736 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 TGFB1I1O43294 461 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 HBP1O60381 514 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 SRGAP2O75044 1071 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 CAND2O75155 1236 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 AKAP3O75969 853 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 PRPF6O94906 941 aaKnown RBP10.73□□□□□ -0.69
PTPRD-207ENST00000463477 FAM13AO94988 1023 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 GCNT3O95395 438 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 MOCS3O95396 460 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 FGBP02675 491 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 PFKMP08237 780 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 RSPH10BP0C881 870 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 MAPTP10636 758 aaKnown RBP10.73□□□□□ -0.69
PTPRD-207ENST00000463477 INSRRP14616 1297 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 UCHL3P15374 230 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 SELPP16109 830 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 ATP4AP20648 1035 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 JAK3P52333 1124 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 CYP4A11Q02928 519 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 GFPT1Q06210 699 aaPredicted RBP10.73□□□□□ -0.69
PTPRD-207ENST00000463477 RAD51AP2Q09MP3 1159 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 KLHL30Q0D2K2 578 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 PPFIA1Q13136 1202 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 ALCAMQ13740 583 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 CASP8Q14790 479 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 EXOC3L4Q17RC7 722 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 MARCH8Q5T0T0 291 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 PSRC1Q6PGN9 363 aaPredicted RBP10.73□□□□□ -0.69
PTPRD-207ENST00000463477 GBP6Q6ZN66 633 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 ZNF365Q70YC5 407 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 IRF2BP2Q7Z5L9 587 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 SLC9A9Q8IVB4 645 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 LMBR1Q8WVP7 490 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 SLC35C1Q96A29 364 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 DYDC2Q96IM9 177 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 FIZ1Q96SL8 496 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 ST7Q9NRC1 585 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms