RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 IFNLR1Q8IU57 520 aaPredicted RBP19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 GUF1Q8N442 669 aaKnown RBP19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 EHBP1Q8NDI1 1231 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 ACRBPQ8NEB7 543 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 PKNOX2Q96KN3 472 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 ACCSQ96QU6 501 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 TUBGCP2Q9BSJ2 902 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 CCDC113Q9H0I3 377 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 TMEM39AQ9NV64 488 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 EPN1Q9Y6I3 576 aaPredicted RBP19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 CCDC151A5D8V7 595 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 CLTBP09497 229 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 EIF4BP23588 611 aaKnown RBP19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 HOXD13P35453 343 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 KRT83P78385 493 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 SYCP3Q8IZU3 236 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 IRX2Q9BZI1 471 aaPredicted RBP19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 PPP1R12CQ9BZL4 782 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 HIPK3Q9H422 1215 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 ARFGAP3Q9NP61 516 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 UMODL1Q5DID0 1318 aa19.62■□□□□ 0.73
ATPAF2-202ENST00000462733 RNF225M0QZC1 329 aaPredicted RBP19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 FGFR1OPO95684 399 aaKnown RBP19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 EDN1P05305 212 aa19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 KNOP1Q1ED39 458 aaKnown RBP19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 BMT2Q1RMZ1 405 aa19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 SLC35F6Q8N357 371 aa19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 HVCN1Q96D96 273 aa19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 BICD1Q96G01 975 aa19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 ERGIC2Q96RQ1 377 aa19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 NOC4LQ9BVI4 516 aaKnown RBP19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 TTYH3Q9C0H2 523 aa19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 PRDM5Q9NQX1 630 aaPredicted RBP19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 UBE4BO95155 1302 aa19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 ALPK3Q96L96 1907 aa19.61■□□□□ 0.73
ATPAF2-202ENST00000462733 SELPP16109 830 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 ABCD1P33897 745 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 ZBED6P86452 979 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 TERF2Q15554 542 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 FAM26DQ5JW98 314 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 TRAF7Q6Q0C0 670 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 LRRC8DQ7L1W4 858 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 MAP4K3Q8IVH8 894 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 CCDC170Q8IYT3 715 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 MSANTD4Q8NCY6 345 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 HNRNPLLQ8WVV9 542 aaKnown RBP19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 CNOT6LQ96LI5 555 aaKnown RBP19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 OSBPL7Q9BZF2 842 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 FZD8Q9H461 694 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 TMEM206Q9H813 350 aa19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 PRMT7Q9NVM4 692 aaPredicted RBP19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 ZNHIT6Q9NWK9 470 aaKnown RBP19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 NOC2LQ9Y3T9 749 aaKnown RBP19.6■□□□□ 0.73
ATPAF2-202ENST00000462733 ZMYM2Q9UBW7 1377 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 TTLL13PA6NNM8 815 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 B4GALT5O43286 388 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 GHRP10912 638 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 SCP2P22307 547 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 CYLC1P35663 651 aaPredicted RBP19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 TMEM132AQ24JP5 1023 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 FKBP15Q5T1M5 1219 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 CATSPER4Q7RTX7 472 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 TARS2Q9BW92 718 aaKnown RBP19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 PARD6BQ9BYG5 372 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 SEMA6BQ9H3T3 888 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 TBX21Q9UL17 535 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 EXOC7Q9UPT5 735 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 PITPNM1O00562 1244 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 ACKR2O00590 384 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 HNRNPDLO14979 420 aaKnown RBP19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 RPS6KA5O75582 802 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 ERLIN2O94905 339 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 CCL23P55773 120 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 PRPF4BQ13523 1007 aaKnown RBP19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 AMHR2Q16671 573 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 FBXO47Q5MNV8 452 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 ANKRD40Q6AI12 368 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 CENPPQ6IPU0 288 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 FAM228AQ86W67 206 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 KCNN1Q92952 543 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 MRPL4Q9BYD3 311 aaKnown RBP19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 KCTD10Q9H3F6 313 aa19.59■□□□□ 0.73
ATPAF2-202ENST00000462733 TISP43B9A030 160 aa19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 CYP2C18P33260 490 aa19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 MTIF2P46199 727 aaKnown RBP19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 LIG4P49917 911 aa19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 LRRC63Q05C16 580 aa19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 MBTPS1Q14703 1052 aa19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 CPB2Q96IY4 423 aa19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 UBXN6Q9BZV1 441 aa19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 GBP3Q9H0R5 595 aa19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 RAB21Q9UL25 225 aa19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 REXO2Q9Y3B8 237 aaKnown RBP19.58■□□□□ 0.72
ATPAF2-202ENST00000462733 SCN5AQ14524 2016 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 TGFB1I1O43294 461 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 TSPAN1O60635 241 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 PLA2G4AP47712 749 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 AMPD2Q01433 879 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 NFX1Q12986 1120 aaKnown RBP19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 LPIN1Q14693 890 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms