RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TSHZ2Q9NRE2 1034 aa9.8□□□□□ -0.84
DDX39B-216ENST00000462421 RNF19AQ9NV58 838 aa9.8□□□□□ -0.84
DDX39B-216ENST00000462421 HCSTQ9UBK5 93 aa9.8□□□□□ -0.84
DDX39B-216ENST00000462421 ADAM28Q9UKQ2 775 aa9.8□□□□□ -0.84
DDX39B-216ENST00000462421 BARX2Q9UMQ3 279 aaPredicted RBP9.8□□□□□ -0.84
DDX39B-216ENST00000462421 GOLGA6L4A6NEF3 574 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 C2orf71A6NGG8 1288 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 CASTOR2A6NHX0 329 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 SFI1A8K8P3 1242 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 FSCN2O14926 492 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 TRAK2O60296 914 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 PPP6R2O75170 966 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 YEATS4O95619 227 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 GLUD1P00367 558 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 LINC00271P0C7V0 271 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ZSCAN22P10073 491 aaPredicted RBP9.79□□□□□ -0.84
DDX39B-216ENST00000462421 DNAJB1P25685 340 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 GRM5P41594 1212 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 SLC12A3P55017 1021 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 COASYQ13057 564 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ALCAMQ13740 583 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 MCM6Q14566 821 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 SLC39A14Q15043 492 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 IL17AQ16552 155 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ECM1Q16610 540 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 AMHR2Q16671 573 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 FOXD4L6Q3SYB3 417 aaPredicted RBP9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ATAT1Q5SQI0 421 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 SLFN12LQ6IEE8 588 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 FOXD4L3Q6VB84 417 aaPredicted RBP9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ZPBP2Q6X784 338 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ADGRD2Q7Z7M1 963 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ADHFE1Q8IWW8 467 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 IQUBQ8NA54 791 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 BSNDQ8WZ55 320 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 STAMQ92783 540 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ZFP42Q96MM3 310 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 TARS2Q9BW92 718 aaKnown RBP9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ZBP1Q9H171 429 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 CUEDC2Q9H467 287 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 SFXN1Q9H9B4 322 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 MRPL44Q9H9J2 332 aaKnown RBP9.79□□□□□ -0.84
DDX39B-216ENST00000462421 RPF1Q9H9Y2 349 aaKnown RBP9.79□□□□□ -0.84
DDX39B-216ENST00000462421 ARHGAP28Q9P2N2 729 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 SEL1LQ9UBV2 794 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 DNAJB4Q9UDY4 337 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 MTMR6Q9Y217 621 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 PCDHB13Q9Y5F0 798 aa9.79□□□□□ -0.84
DDX39B-216ENST00000462421 PTPRSQ13332 1948 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 MEIS3P2A8K0S8 358 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 MBTPS2O43462 519 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 CUTAO60888 179 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 B3GAT3O94766 335 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 CLSTN1O94985 981 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 F13A1P00488 732 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 IL9P15248 144 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 KRT85P78386 507 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 POSTNQ15063 836 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 SPECC1Q5M775 1068 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 ANKRD54Q6NXT1 300 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 FUT10Q6P4F1 479 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 DYMQ7RTS9 669 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 HAUS6Q7Z4H7 955 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 ZNF280BQ86YH2 543 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 COLGALT2Q8IYK4 626 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.78□□□□□ -0.84
DDX39B-216ENST00000462421 NOC3LQ8WTT2 800 aaKnown RBP9.78□□□□□ -0.84
DDX39B-216ENST00000462421 RIN2Q8WYP3 895 aaPredicted RBP9.78□□□□□ -0.84
DDX39B-216ENST00000462421 ACSF2Q96CM8 615 aaPredicted RBP9.78□□□□□ -0.84
DDX39B-216ENST00000462421 HVCN1Q96D96 273 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 FAM212AQ96EL1 285 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 PNMA5Q96PV4 448 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 USP28Q96RU2 1077 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 ACO2Q99798 780 aaKnown RBP9.78□□□□□ -0.84
DDX39B-216ENST00000462421 REEP2Q9BRK0 252 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 MMTAG2Q9BU76 263 aaKnown RBP9.78□□□□□ -0.84
DDX39B-216ENST00000462421 MSTO1Q9BUK6 570 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 APOL5Q9BWW9 433 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 CCDC113Q9H0I3 377 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 MAGEF1Q9HAY2 307 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 POLD4Q9HCU8 107 aa9.78□□□□□ -0.84
DDX39B-216ENST00000462421 NLRC5Q86WI3 1866 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 HIDE1A8MVS5 230 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 INPPL1O15357 1258 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 LINC01565O15544 149 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 CLASP2O75122 1294 aaKnown RBP9.77□□□□□ -0.85
DDX39B-216ENST00000462421 TBX10O75333 385 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 DDHD2O94830 711 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 GCNT3O95395 438 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 CLTAP09496 248 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 ATXN8OSP0DMR3 200 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 MAPTP10636 758 aaKnown RBP9.77□□□□□ -0.85
DDX39B-216ENST00000462421 RFX1P22670 979 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 ELF1P32519 619 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 MCM4P33991 863 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
DDX39B-216ENST00000462421 NASPP49321 788 aaPredicted RBP9.77□□□□□ -0.85
DDX39B-216ENST00000462421 PTPN14Q15678 1187 aa9.77□□□□□ -0.85
DDX39B-216ENST00000462421 SMAD2Q15796 467 aaKnown RBP9.77□□□□□ -0.85
DDX39B-216ENST00000462421 CTC1Q2NKJ3 1217 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms