RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 YARSP54577 528 aaKnown RBP11.61□□□□□ -0.55
RTF1-202ENST00000462276 UBASH3AP57075 661 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 FANCCQ00597 558 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 CETN1Q12798 172 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 BFSP1Q12934 665 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 DSC3Q14574 896 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 PSMD6Q15008 389 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 KRT31Q15323 416 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 PLEKHG4Q58EX7 1191 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 EEF1DP3Q658K8 133 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 TWF2Q6IBS0 349 aaKnown RBP11.61□□□□□ -0.55
RTF1-202ENST00000462276 ZBTB33Q86T24 672 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 NT5DC4Q86YG4 428 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 BRSK2Q8IWQ3 736 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 TMEM199Q8N511 208 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 PGBD4Q96DM1 585 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 CPB2Q96IY4 423 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 ACAP3Q96P50 834 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 IKZF4Q9H2S9 585 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 RPF1Q9H9Y2 349 aaKnown RBP11.61□□□□□ -0.55
RTF1-202ENST00000462276 RBAKQ9NYW8 714 aaPredicted RBP11.61□□□□□ -0.55
RTF1-202ENST00000462276 CPSF3Q9UKF6 684 aaKnown RBP11.61□□□□□ -0.55
RTF1-202ENST00000462276 GTPBP10A4D1E9 387 aaKnown RBP11.6□□□□□ -0.55
RTF1-202ENST00000462276 EOMESO95936 686 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 STAG3L1P0CL83 205 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 ATP1A3P13637 1013 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 RAG1P15918 1043 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 FGFR4P22455 802 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 ACOT2P49753 483 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 CLDN10P78369 228 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 FAM189BP81408 668 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 CYP24A1Q07973 514 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 MBTPS1Q14703 1052 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 VWA3BQ502W6 1294 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 FKBP15Q5T1M5 1219 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 MFSD5Q6N075 450 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 CRELD2Q6UXH1 353 aaPredicted RBP11.6□□□□□ -0.55
RTF1-202ENST00000462276 SLC24A5Q71RS6 500 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 MRPL10Q7Z7H8 261 aaKnown RBP11.6□□□□□ -0.55
RTF1-202ENST00000462276 CBWD2Q8IUF1 395 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 CREBRFQ8IUR6 639 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 PARD3BQ8TEW8 1205 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 SAAL1Q96ER3 474 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 EEF2KMTQ96G04 330 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 FNBP1Q96RU3 617 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 HAPLN2Q9GZV7 340 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 TSPYL2Q9H2G4 693 aaPredicted RBP11.6□□□□□ -0.55
RTF1-202ENST00000462276 RGS18Q9NS28 235 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 USP20Q9Y2K6 914 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 DERAQ9Y315 318 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 PCDHB2Q9Y5E7 798 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 MKI67P46013 3256 aaKnown RBP11.6□□□□□ -0.55
RTF1-202ENST00000462276 DNAH12Q6ZR08 3092 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 ARID2Q68CP9 1835 aa11.6□□□□□ -0.55
RTF1-202ENST00000462276 A0A1B0GTH6 734 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 LGALS16A8MUM7 142 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 NBNO60934 754 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 NPTXRO95502 500 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 AFPP02771 609 aaKnown RBP11.59□□□□□ -0.55
RTF1-202ENST00000462276 CYP2C18P33260 490 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 COPB1P53618 953 aaKnown RBP11.59□□□□□ -0.55
RTF1-202ENST00000462276 NR1I3Q14994 352 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 UBXN11Q5T124 520 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 SMYD5Q6GMV2 418 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 APTXQ7Z2E3 356 aaKnown RBP11.59□□□□□ -0.55
RTF1-202ENST00000462276 THNSL1Q8IYQ7 743 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 RDH13Q8NBN7 331 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 CACTINQ8WUQ7 758 aaKnown RBP11.59□□□□□ -0.55
RTF1-202ENST00000462276 SLC35C1Q96A29 364 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 IQCDQ96DY2 449 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 MRFAP1L1Q96HT8 127 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 ADAM2Q99965 735 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 TRIM5Q9C035 493 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 TMX1Q9H3N1 280 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 NDST4Q9H3R1 872 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 ELAC1Q9H777 363 aaKnown RBP11.59□□□□□ -0.55
RTF1-202ENST00000462276 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
RTF1-202ENST00000462276 FAM105AQ9NUU6 356 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 GIT1Q9Y2X7 761 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 BRCA2P51587 3418 aa11.59□□□□□ -0.55
RTF1-202ENST00000462276 ABHD14A-ACY1A0A1B0GW23 586 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 A0A1W2PQC6 194 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 TTC26A0AVF1 554 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 GOLGA8IPA6NC78 632 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 TRIM43BA6NCK2 446 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 GOLGA8JA6NMD2 632 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 XPOTO43592 962 aaKnown RBP11.58□□□□□ -0.56
RTF1-202ENST00000462276 HARSP12081 509 aaKnown RBP11.58□□□□□ -0.56
RTF1-202ENST00000462276 CCL23P55773 120 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 IKBKEQ14164 716 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 GPNMBQ14956 572 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 ENOX2Q16206 610 aaKnown RBP11.58□□□□□ -0.56
RTF1-202ENST00000462276 DUOXA2Q1HG44 320 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 XKR4Q5GH76 650 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 CNKSR3Q6P9H4 555 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 WDR49Q8IV35 697 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms