RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 KIFC3Q9BVG8 833 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 ATP6V0A4Q9HBG4 840 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 PDGFCQ9NRA1 345 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 DMAC2Q9NW81 257 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 NCANO14594 1321 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 TISP43B9A030 160 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 IGF2BP3O00425 579 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 H2AFZP0C0S5 128 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 MDH1P40925 334 aaKnown RBP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 ZNF157P51786 506 aaPredicted RBP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 GUCY2FP51841 1108 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 DMP1Q13316 513 aaPredicted RBP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 GRB14Q14449 540 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 TRADDQ15628 312 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 SPDYCQ5MJ68 293 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 H2AFVQ71UI9 128 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 GPR142Q7Z601 462 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 ARFGAP2Q8N6H7 521 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 TMEM161BQ8NDZ6 487 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 COPS5Q92905 334 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 HES6Q96HZ4 224 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 GPR20Q99678 358 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 SYT11Q9BT88 431 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 MKNK1Q9BUB5 465 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 DIS3Q9Y2L1 958 aaKnown RBP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 NOC2LQ9Y3T9 749 aaKnown RBP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 ADGRA3Q8IWK6 1321 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 ADGRA2Q96PE1 1338 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 DDX3XO00571 662 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 NDUFAB1O14561 156 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 SART1O43290 800 aaKnown RBP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 STRNO43815 780 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 HSD17B3P37058 310 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 BIRC3Q13489 604 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 MTMR3Q13615 1198 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 EMC2Q15006 297 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 UAP1Q16222 522 aaPredicted RBP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 PTGISQ16647 500 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 KCTD16Q68DU8 428 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 SAPCD2Q86UD0 394 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 NT5DC3Q86UY8 548 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 FMNL3Q8IVF7 1028 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 KLHL7Q8IXQ5 586 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 SYCP3Q8IZU3 236 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 ACCSQ96QU6 501 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 NIFKQ9BYG3 293 aaKnown RBP13.42□□□□□ -0.26
COL4A6-204ENST00000461897 TMEM206Q9H813 350 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 C17orf75Q9HAS0 396 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 PLAAQ9Y263 795 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 IVNS1ABPQ9Y6Y0 642 aa13.42□□□□□ -0.26
COL4A6-204ENST00000461897 CCDC169A6NNP5 214 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 ANKRD65E5RJM6 399 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 CEP104O60308 925 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 ERLIN2O94905 339 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 TXNP10599 105 aaKnown RBP13.41□□□□□ -0.26
COL4A6-204ENST00000461897 CYP2J2P51589 502 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 STAT5BP51692 787 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 RTP1P59025 263 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 POU5F1Q01860 360 aaKnown RBP13.41□□□□□ -0.26
COL4A6-204ENST00000461897 DCAF17Q5H9S7 520 aaPredicted RBP13.41□□□□□ -0.26
COL4A6-204ENST00000461897 AGBL2Q5U5Z8 902 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 FAM160B1Q5W0V3 765 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 ZNF467Q7Z7K2 595 aaPredicted RBP13.41□□□□□ -0.26
COL4A6-204ENST00000461897 TRIM50Q86XT4 487 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 SLC9A9Q8IVB4 645 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 FAM186BQ8IYM0 893 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 SLC17A8Q8NDX2 589 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 SPIRE2Q8WWL2 714 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 NTPCRQ9BSD7 190 aaKnown RBP13.41□□□□□ -0.26
COL4A6-204ENST00000461897 KATNBL1Q9H079 304 aa13.41□□□□□ -0.26
COL4A6-204ENST00000461897 DHX33Q9H6R0 707 aaKnown RBP13.41□□□□□ -0.26
COL4A6-204ENST00000461897 AJAP1Q9UKB5 411 aaPredicted RBP13.41□□□□□ -0.26
COL4A6-204ENST00000461897 LGR5O75473 907 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 PSMC2P35998 433 aaKnown RBP13.4□□□□□ -0.26
COL4A6-204ENST00000461897 DNA2P51530 1060 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 POLGP54098 1239 aaPredicted RBP13.4□□□□□ -0.26
COL4A6-204ENST00000461897 TTLL4Q14679 1199 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 TARBP2Q15633 366 aaKnown RBP13.4□□□□□ -0.26
COL4A6-204ENST00000461897 PPP2R5EQ16537 467 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 NAA35Q5VZE5 725 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 ICE2Q659A1 982 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 TAPT1Q6NXT6 567 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 MICALCLQ6ZW33 695 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 PEX26Q7Z412 305 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 MAP4K3Q8IVH8 894 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 C12orf56Q8IXR9 622 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 DHX37Q8IY37 1157 aaKnown RBP13.4□□□□□ -0.26
COL4A6-204ENST00000461897 TMEM174Q8WUU8 243 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 SPATA33Q96N06 139 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 POLR3FQ9H1D9 316 aaPredicted RBP13.4□□□□□ -0.26
COL4A6-204ENST00000461897 KMT5AQ9NQR1 393 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 GCNT4Q9P109 453 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 SIP14410 1827 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 PASKQ96RG2 1323 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 DENND3A2RUS2 1198 aa13.4□□□□□ -0.26
COL4A6-204ENST00000461897 NOP56O00567 594 aaKnown RBP13.4□□□□□ -0.26
COL4A6-204ENST00000461897 MEFVO15553 781 aaPredicted RBP13.4□□□□□ -0.26
COL4A6-204ENST00000461897 FSBPO95073 299 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms