RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TRIM67Q6ZTA4 783 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 HFE2Q6ZVN8 426 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 KCTD17Q8N5Z5 321 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 RABGGTAQ92696 567 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 DRC1Q96MC2 740 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 PNMA5Q96PV4 448 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 CXCL16Q9H2A7 254 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 ADAM28Q9UKQ2 775 aa20.86■□□□□ 0.93
VARS-220ENST00000461874 TADA2AO75478 443 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 THP07101 528 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 PLA2G5P39877 138 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 MAPK7Q13164 816 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 DMP1Q13316 513 aaPredicted RBP20.85■□□□□ 0.93
VARS-220ENST00000461874 HSP90AA2PQ14568 343 aaPredicted RBP20.85■□□□□ 0.93
VARS-220ENST00000461874 USP41Q3LFD5 358 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 GPR149Q86SP6 731 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 GPR65Q8IYL9 337 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 FEZF2Q8TBJ5 459 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 PAAF1Q9BRP4 392 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 TMEM134Q9H6X4 195 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 C17orf75Q9HAS0 396 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 ARHGAP28Q9P2N2 729 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 CACNG4Q9UBN1 327 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 TNFSF13BQ9Y275 285 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 GDAQ9Y2T3 454 aa20.85■□□□□ 0.93
VARS-220ENST00000461874 C2CD4DB7Z1M9 353 aa20.84■□□□□ 0.93
VARS-220ENST00000461874 GUCY2CP25092 1073 aa20.84■□□□□ 0.93
VARS-220ENST00000461874 NAB2Q15742 525 aa20.84■□□□□ 0.93
VARS-220ENST00000461874 PTPN21Q16825 1174 aa20.84■□□□□ 0.93
VARS-220ENST00000461874 APBB1IPQ7Z5R6 666 aaPredicted RBP20.84■□□□□ 0.93
VARS-220ENST00000461874 FAM122AQ96E09 287 aa20.84■□□□□ 0.93
VARS-220ENST00000461874 B3GALT6Q96L58 329 aa20.84■□□□□ 0.93
VARS-220ENST00000461874 TIPINQ9BVW5 301 aa20.84■□□□□ 0.93
VARS-220ENST00000461874 NT5C3AQ9H0P0 336 aa20.84■□□□□ 0.93
VARS-220ENST00000461874 KMT5AQ9NQR1 393 aa20.84■□□□□ 0.93
VARS-220ENST00000461874 RBM19Q9Y4C8 960 aaKnown RBP20.84■□□□□ 0.93
VARS-220ENST00000461874 PHLPP2Q6ZVD8 1323 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 TDRD15B5MCY1 1934 aaKnown RBP20.83■□□□□ 0.93
VARS-220ENST00000461874 TMEM221A6NGB7 291 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 CASTOR2A6NHX0 329 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 SPDYE4A6NLX3 237 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 M0R296 226 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 GLUD1P00367 558 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 TAS1R3Q7RTX0 852 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 BMP8AQ7Z5Y6 402 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 SYT2Q8N9I0 419 aaPredicted RBP20.83■□□□□ 0.93
VARS-220ENST00000461874 MFSD14AQ96MC6 490 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 PLIN2Q99541 437 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 ACO2Q99798 780 aaKnown RBP20.83■□□□□ 0.93
VARS-220ENST00000461874 PTPRHQ9HD43 1115 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 MAN1C1Q9NR34 630 aa20.83■□□□□ 0.93
VARS-220ENST00000461874 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.83■□□□□ 0.93
VARS-220ENST00000461874 MUC6Q6W4X9 2439 aa20.83■□□□□ 0.92
VARS-220ENST00000461874 SF3B1O75533 1304 aaKnown RBP eCLIP20.82■□□□□ 0.92
VARS-220ENST00000461874 SFI1A8K8P3 1242 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 C1RP00736 705 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 SIGLEC14Q08ET2 396 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 CUL4AQ13619 759 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 TMEM119Q4V9L6 283 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 C15orf39Q6ZRI6 1047 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 BRAPQ7Z569 592 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 CMASQ8NFW8 434 aaPredicted RBP20.82■□□□□ 0.92
VARS-220ENST00000461874 RIN2Q8WYP3 895 aaPredicted RBP20.82■□□□□ 0.92
VARS-220ENST00000461874 NTPCRQ9BSD7 190 aaKnown RBP20.82■□□□□ 0.92
VARS-220ENST00000461874 MRPL4Q9BYD3 311 aaKnown RBP20.82■□□□□ 0.92
VARS-220ENST00000461874 FNIP2Q9P278 1114 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 DPP7Q9UHL4 492 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 USTQ9Y2C2 406 aa20.82■□□□□ 0.92
VARS-220ENST00000461874 SLC16A4O15374 487 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 KIF4AO95239 1232 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 PLA2G4BP0C869 781 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 SLC12A3P55017 1021 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 ELMSAN1Q6PJG2 1045 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 ZDHHC14Q8IZN3 488 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 TDRD5Q8NAT2 981 aaKnown RBP20.81■□□□□ 0.92
VARS-220ENST00000461874 HASPINQ8TF76 798 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 SPIRE2Q8WWL2 714 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 CDK5RAP3Q96JB5 506 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 AK8Q96MA6 479 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 TARS2Q9BW92 718 aaKnown RBP20.81■□□□□ 0.92
VARS-220ENST00000461874 CDT1Q9H211 546 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 KCNG1Q9UIX4 513 aa20.81■□□□□ 0.92
VARS-220ENST00000461874 SLC26A4O43511 780 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 BMP15O95972 392 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 PLS3P13797 630 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 GRM5P41594 1212 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 CREMQ03060 361 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 RAD51AP2Q09MP3 1159 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 RTP2Q5QGT7 225 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 ZBTB33Q86T24 672 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 PALB2Q86YC2 1186 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 KREMEN2Q8NCW0 462 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 HDAC7Q8WUI4 952 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 PBXIP1Q96AQ6 731 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 PPP1R10Q96QC0 940 aaKnown RBP20.8■□□□□ 0.92
VARS-220ENST00000461874 TTPALQ9BTX7 342 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 KCND2Q9NZV8 630 aa20.8■□□□□ 0.92
VARS-220ENST00000461874 ZDBF2Q9HCK1 2354 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 ABLIM1O14639 778 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 TGM5O43548 720 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms