RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 NOMO1Q15155 1222 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 AGBL4Q5VU57 503 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 Q6ZUG5 572 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 CCDC149Q6ZUS6 474 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 PDZD4Q76G19 769 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 CLEC14AQ86T13 490 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 DAAM2Q86T65 1068 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 OR7D4Q8NG98 312 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 NSUN6Q8TEA1 469 aaKnown RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 ZNF526Q8TF50 670 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 CASKIN2Q8WXE0 1202 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 HOXB13Q92826 284 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 GCDHQ92947 438 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 NOX5Q96PH1 765 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 SPATA25Q9BR10 227 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 OR10A2Q9H208 303 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 TMEM140Q9NV12 185 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 ADAM29Q9UKF5 820 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 LIMCH1Q9UPQ0 1083 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 CTDP1Q9Y5B0 961 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-212ENST00000461608 PAXBP1Q9Y5B6 917 aa3.83□□□□□ -1.8
HDAC6-212ENST00000461608 PMS2P1A4D2B8 440 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 FRS3O43559 492 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 ALDH1A2O94788 518 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 VSIG10L2P0DP72 767 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 GSPT1P15170 499 aaKnown RBP3.82□□□□□ -1.8
HDAC6-212ENST00000461608 HTR1BP28222 390 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 KIR2DL3P43628 341 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 USP14P54578 494 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 MLLT6P55198 1093 aaPredicted RBP3.82□□□□□ -1.8
HDAC6-212ENST00000461608 PER3P56645 1201 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 ANTXR2P58335 489 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 NFYCQ13952 458 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 POLD3Q15054 466 aaPredicted RBP3.82□□□□□ -1.8
HDAC6-212ENST00000461608 C3orf36Q3SXR2 165 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 COBLL1Q53SF7 1204 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 CCDC157Q569K6 752 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 PHF19Q5T6S3 580 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 CYB5RLQ6IPT4 315 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 DARS2Q6PI48 645 aaKnown RBP3.82□□□□□ -1.8
HDAC6-212ENST00000461608 USP30Q70CQ3 517 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 OVCH2Q7RTZ1 564 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 PLEKHH3Q7Z736 793 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 RALYLQ86SE5 291 aaKnown RBP3.82□□□□□ -1.8
HDAC6-212ENST00000461608 STK32CQ86UX6 486 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 FAM124AQ86V42 546 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 ZFPM1Q8IX07 1006 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 KIAA0319LQ8IZA0 1049 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 PLA2G15Q8NCC3 412 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 C3orf20Q8ND61 904 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 TIFAQ96CG3 184 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 ZC3H10Q96K80 434 aaKnown RBP3.82□□□□□ -1.8
HDAC6-212ENST00000461608 UHRF1Q96T88 793 aaPredicted RBP3.82□□□□□ -1.8
HDAC6-212ENST00000461608 BTBD1Q9H0C5 482 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 SLC6A15Q9H2J7 730 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 WDCPQ9H6R7 721 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 DMRT3Q9NQL9 472 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 CNNM1Q9NRU3 951 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 MOCS1Q9NZB8 636 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 FEZ2Q9UHY8 353 aaPredicted RBP3.82□□□□□ -1.8
HDAC6-212ENST00000461608 DUSP10Q9Y6W6 482 aa3.82□□□□□ -1.8
HDAC6-212ENST00000461608 C1QTNF3-AMACRE9PGA6 284 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 GPR32O75388 356 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 IL2RBP14784 551 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 HNRNPLP14866 589 aaKnown RBP eCLIP3.81□□□□□ -1.8
HDAC6-212ENST00000461608 CSF2RBP32927 897 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 CNR2P34972 360 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 HTR3AP46098 478 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 SARSP49591 514 aaKnown RBP3.81□□□□□ -1.8
HDAC6-212ENST00000461608 MRE11P49959 708 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 HK3P52790 923 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 DUSP2Q05923 314 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 NOGQ13253 232 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 SP140Q13342 867 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 PCOLCEQ15113 449 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 SYCP2LQ5T4T6 812 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 KRT40Q6A162 431 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 MAEAQ7L5Y9 396 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 RHOT1Q8IXI2 618 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 CARFQ8N187 725 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 KRT78Q8N1N4 520 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 TTC9BQ8N6N2 239 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 PIK3C3Q8NEB9 887 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 NUDT10Q8NFP7 164 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 PMM1Q92871 262 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 NUDT11Q96G61 164 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 LCORQ96JN0 433 aaPredicted RBP3.81□□□□□ -1.8
HDAC6-212ENST00000461608 TNIP3Q96KP6 325 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 SAMD11Q96NU1 681 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 MPHOSPH6Q99547 160 aaKnown RBP3.81□□□□□ -1.8
HDAC6-212ENST00000461608 CGRRF1Q99675 332 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 POLR3GLQ9BT43 218 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 B3GNT5Q9BYG0 378 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 LRRC27Q9C0I9 530 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 SENP6Q9GZR1 1112 aaPredicted RBP3.81□□□□□ -1.8
HDAC6-212ENST00000461608 NUP62CLQ9H1M0 184 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 TLR9Q9NR96 1032 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 GNL3LQ9NVN8 582 aaKnown RBP3.81□□□□□ -1.8
HDAC6-212ENST00000461608 SPATA6Q9NWH7 488 aaPredicted RBP3.81□□□□□ -1.8
HDAC6-212ENST00000461608 GPRC5DQ9NZD1 345 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms