RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 LXNQ9BS40 222 aa6.6□□□□□ -1.35
NUP98-208ENST00000461047 FTOQ9C0B1 505 aaKnown RBP eCLIP6.6□□□□□ -1.35
NUP98-208ENST00000461047 SENP6Q9GZR1 1112 aaPredicted RBP6.6□□□□□ -1.35
NUP98-208ENST00000461047 MAGEF1Q9HAY2 307 aa6.6□□□□□ -1.35
NUP98-208ENST00000461047 DDX19AQ9NUU7 478 aaKnown RBP6.6□□□□□ -1.35
NUP98-208ENST00000461047 RGL1Q9NZL6 768 aa6.6□□□□□ -1.35
NUP98-208ENST00000461047 KCND2Q9NZV8 630 aa6.6□□□□□ -1.35
NUP98-208ENST00000461047 DBR1Q9UK59 544 aaKnown RBP6.6□□□□□ -1.35
NUP98-208ENST00000461047 KCNH3Q9ULD8 1083 aa6.6□□□□□ -1.35
NUP98-208ENST00000461047 RBBP6Q7Z6E9 1792 aaKnown RBP6.59□□□□□ -1.35
NUP98-208ENST00000461047 CASP8AP2Q9UKL3 1982 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 ADCY6O43306 1168 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 EYA4O95677 639 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 MBD3O95983 291 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 F2P00734 622 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 SSBP05455 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
NUP98-208ENST00000461047 ZNF286BP0CG31 522 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 INSRRP14616 1297 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 MARK3P27448 753 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 SYKP43405 635 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 POLGP54098 1239 aaPredicted RBP6.59□□□□□ -1.35
NUP98-208ENST00000461047 PRKCEQ02156 737 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 ITGA7Q13683 1181 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 PLCB4Q15147 1175 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 IL17AQ16552 155 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 SKOR2Q2VWA4 1001 aaPredicted RBP6.59□□□□□ -1.35
NUP98-208ENST00000461047 TMEM63BQ5T3F8 832 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 RESP18Q5W5W9 173 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 XKR5Q6UX68 686 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 TRMT1LQ7Z2T5 733 aaKnown RBP6.59□□□□□ -1.35
NUP98-208ENST00000461047 CCDC60Q8IWA6 550 aaPredicted RBP6.59□□□□□ -1.35
NUP98-208ENST00000461047 NME8Q8N427 588 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 CEP120Q8N960 986 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 FSIP1Q8NA03 581 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 KLHL23Q8NBE8 558 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 TMEM87AQ8NBN3 555 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 MCPH1Q8NEM0 835 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 SYAP1Q96A49 352 aaPredicted RBP6.59□□□□□ -1.35
NUP98-208ENST00000461047 EPSTI1Q96J88 318 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 CEP170P1Q96L14 293 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 CLIC6Q96NY7 704 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 MAP7D2Q96T17 732 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 C16orf70Q9BSU1 422 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 HTATIP2Q9BUP3 242 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 TIPINQ9BVW5 301 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 GTPBP4Q9BZE4 634 aaKnown RBP6.59□□□□□ -1.35
NUP98-208ENST00000461047 C11orf49Q9H6J7 331 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 BCAS3Q9H6U6 928 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 ZFP64Q9NPA5 681 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 PRKAG2Q9UGJ0 569 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 MGAMO43451 1857 aa6.59□□□□□ -1.35
NUP98-208ENST00000461047 IGSF9BQ9UPX0 1349 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 A0A1W2PQ45 241 aaPredicted RBP6.58□□□□□ -1.36
NUP98-208ENST00000461047 A0A1W2PQY0 241 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 M0QZ92 97 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 ARVCFO00192 962 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 HAS3O00219 553 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 FSCN2O14926 492 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 CTAGE5O15320 804 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 POLR2DO15514 142 aaKnown RBP6.58□□□□□ -1.36
NUP98-208ENST00000461047 ASAP2O43150 1006 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 MED24O75448 989 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 SMC2O95347 1197 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 ABL1P00519 1130 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 MYL1P05976 194 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 SMIM10L2AP0DMW4 78 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 SMIM10L2BP0DMW5 78 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 PLCG1P19174 1290 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 SCP2P22307 547 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 CDC25AP30304 524 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 ABCD1P33897 745 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 IGBP1P78318 339 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 FAM160A1Q05DH4 1040 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 EHHADHQ08426 723 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 NCBP1Q09161 790 aaKnown RBP6.58□□□□□ -1.36
NUP98-208ENST00000461047 MTMR3Q13615 1198 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 TFDP1Q14186 410 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 KARSQ15046 597 aaKnown RBP6.58□□□□□ -1.36
NUP98-208ENST00000461047 PPP2R5AQ15172 486 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 PTGISQ16647 500 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 MTERF2Q49AM1 385 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 SPECC1Q5M775 1068 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 ODR4Q5SWX8 454 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 HYIQ5T013 277 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 AXDND1Q5T1B0 1012 aaPredicted RBP6.58□□□□□ -1.36
NUP98-208ENST00000461047 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
NUP98-208ENST00000461047 TAF2Q6P1X5 1199 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 SHC4Q6S5L8 630 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 SLC39A5Q6ZMH5 540 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 PRR23CQ6ZRP0 262 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 FAM43BQ6ZT52 329 aaPredicted RBP6.58□□□□□ -1.36
NUP98-208ENST00000461047 ACAD11Q709F0 780 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 SESTD1Q86VW0 696 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 METTL13Q8N6R0 699 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 PDILTQ8N807 584 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 C1orf127Q8N9H9 656 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 SLC17A8Q8NDX2 589 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 CNNM3Q8NE01 707 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 PIGOQ8TEQ8 1089 aa6.58□□□□□ -1.36
NUP98-208ENST00000461047 LARP4BQ92615 738 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms