RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SLC7A3Q8WY07 619 aa16.52■□□□□ 0.23
LMNB1-203ENST00000460265 KIAA1683Q9H0B3 1180 aa16.52■□□□□ 0.23
LMNB1-203ENST00000460265 DNAJC17Q9NVM6 304 aaKnown RBP16.52■□□□□ 0.23
LMNB1-203ENST00000460265 SLC26A4O43511 780 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 IGBP1P78318 339 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 ACCSLQ4AC99 568 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 SLC47A2Q86VL8 602 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 NSMCE1Q8WV22 266 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 CLEC4DQ8WXI8 215 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 MOV10L1Q9BXT6 1211 aaKnown RBP16.51■□□□□ 0.23
LMNB1-203ENST00000460265 YIPF3Q9GZM5 350 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
LMNB1-203ENST00000460265 SLC9A2Q9UBY0 812 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 PLAAQ9Y263 795 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 ALG6Q9Y672 507 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 UBR3Q6ZT12 1888 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 GSTTP1A0A1W2PQM5 241 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 CCNE2O96020 404 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 CD58P19256 250 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 TRIP13Q15645 432 aaPredicted RBP16.51■□□□□ 0.23
LMNB1-203ENST00000460265 KRT39Q6A163 491 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 TAS1R2Q8TE23 839 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 TBX20Q9UMR3 447 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 LCA5LO95447 670 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 SLC8A3P57103 927 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 HIBCHQ6NVY1 386 aaPredicted RBP16.51■□□□□ 0.23
LMNB1-203ENST00000460265 PNMA8AQ86V59 439 aaPredicted RBP16.51■□□□□ 0.23
LMNB1-203ENST00000460265 FAM228AQ86W67 206 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 CDR2LQ86X02 465 aaPredicted RBP16.51■□□□□ 0.23
LMNB1-203ENST00000460265 KCND2Q9NZV8 630 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 DAAM1Q9Y4D1 1078 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 PCDHGC5Q9Y5F6 944 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 CSADQ9Y600 493 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 SCN9AQ15858 1988 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 ZNF536O15090 1300 aa16.51■□□□□ 0.23
LMNB1-203ENST00000460265 MYZAPP0CAP1 466 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 CDC25CP30307 473 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 PIK3CAP42336 1068 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 PRKCEQ02156 737 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 IMPG2Q9BZV3 1241 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 TMEM117Q9H0C3 514 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 MYH11P35749 1972 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 ZNF233A6NK53 670 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 SNUPNO95149 360 aaKnown RBP16.5■□□□□ 0.23
LMNB1-203ENST00000460265 MMEP08473 750 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 KRT19P08727 400 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 GPC5P78333 572 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 DRP2Q13474 957 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 TATDN2Q93075 761 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 LRRC45Q96CN5 670 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 TEX13BQ9BXU2 312 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 SFNP31947 248 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 KCNJ1P48048 391 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 CPA5Q8WXQ8 436 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 ACAD9Q9H845 621 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 SIX2Q9NPC8 291 aa16.5■□□□□ 0.23
LMNB1-203ENST00000460265 ANKRD62A6NC57 917 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 DKC1O60832 514 aaKnown RBP eCLIP16.49■□□□□ 0.23
LMNB1-203ENST00000460265 FAM107AO95990 144 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 PLCB3Q01970 1234 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 BMT2Q1RMZ1 405 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 GLE1Q53GS7 698 aaKnown RBP16.49■□□□□ 0.23
LMNB1-203ENST00000460265 FBXL13Q8NEE6 735 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 NAP1L3Q99457 506 aaPredicted RBP16.49■□□□□ 0.23
LMNB1-203ENST00000460265 SELENOSQ9BQE4 189 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 NUP85Q9BW27 656 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 HEMGNQ9BXL5 484 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 AZI2Q9H6S1 392 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 BATF3Q9NR55 127 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 ASIC3Q9UHC3 531 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 TELO2Q9Y4R8 837 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 TBC1D12O60347 775 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 MDH1P40925 334 aaKnown RBP16.49■□□□□ 0.23
LMNB1-203ENST00000460265 SLCO1A2P46721 670 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 ACTR2P61160 394 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 MKRN3Q13064 507 aaKnown RBP16.49■□□□□ 0.23
LMNB1-203ENST00000460265 FKBP1CQ5VVH2 108 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 MIS18BP1Q6P0N0 1132 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 SCYL3Q8IZE3 742 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 TAF1DQ9H5J8 278 aaPredicted RBP16.49■□□□□ 0.23
LMNB1-203ENST00000460265 CNOT8Q9UFF9 292 aaKnown RBP16.49■□□□□ 0.23
LMNB1-203ENST00000460265 RASAL2Q9UJF2 1139 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 MTUS1Q9ULD2 1270 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 PCDHB4Q9Y5E5 795 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 ADRB2P07550 413 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 CLTAP09496 248 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 HSD17B4P51659 736 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 DR1Q01658 176 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 ANO5Q75V66 913 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 TCP11Q8WWU5 503 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 FAM118BQ9BPY3 351 aa16.49■□□□□ 0.23
LMNB1-203ENST00000460265 THSD7AQ9UPZ6 1657 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 MAPK7Q13164 816 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 STXBP2Q15833 593 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 THEMIS2Q5TEJ8 643 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms