RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 TP73O15350 636 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 SUN1O94901 812 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 FAM13AO94988 1023 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 CLTAP09496 248 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 BCRP11274 1271 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 MUTP22033 750 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 CCND1P24385 295 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 NMT1P30419 496 aaKnown RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 GPC5P78333 572 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 CYP4A11Q02928 519 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 COG2Q14746 738 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 FAM133BQ5BKY9 247 aaKnown RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 HS2ST1Q7LGA3 356 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 TRIM74Q86UV6 250 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 TRIM73Q86UV7 250 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 AMIGO3Q86WK7 504 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 SLC13A5Q86YT5 568 aaPredicted RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 TBC1D31Q96DN5 1066 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 STAMBPL1Q96FJ0 436 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 STRA6Q9BX79 667 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 AMNQ9BXJ7 453 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 LRRC19Q9H756 370 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 PARVGQ9HBI0 331 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 ARHGEF3Q9NR81 526 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 AGPAT3Q9NRZ7 376 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 WHRNQ9P202 907 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 CTTNBP2NLQ9P2B4 639 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 PRKAG3Q9UGI9 489 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 FRMD4BQ9Y2L6 1034 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 ANKRD31Q8N7Z5 1873 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 ANKRD63C9JTQ0 380 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 TCEA3O75764 348 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 ANP32DO95626 131 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 FTLP02792 175 aaPredicted RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 TRIM49P0CI25 452 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 TRIM49CP0CI26 452 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 PYGMP11217 842 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 GZMAP12544 262 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 COMTP21964 271 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 ATP5DP30049 168 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 GBP2P32456 591 aaPredicted RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 SKIV2L2P42285 1042 aaKnown RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 IFNAR2P48551 515 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 ALDH5A1P51649 535 aaPredicted RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 COPS2P61201 443 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 KCNJ2P63252 427 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 BFSP1Q12934 665 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 TBC1D25Q3MII6 688 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 ZC2HC1CQ53FD0 456 aaPredicted RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 RHBDF2Q6PJF5 856 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 VSTM1Q6UX27 236 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 STXBP4Q6ZWJ1 553 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 ASRGL1Q7L266 308 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 PNMA8AQ86V59 439 aaPredicted RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 MYCT1Q8N699 235 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 CNBD1Q8NA66 436 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 AGAP11Q8TF27 550 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 ZNF483Q8TF39 744 aaPredicted RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 SLC20A1Q8WUM9 679 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 NSMCE1Q8WV22 266 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 CKAP2Q8WWK9 683 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 IKZF4Q9H2S9 585 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 CDC42EP4Q9H3Q1 356 aaKnown RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 ECT2Q9H8V3 914 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 AAASQ9NRG9 546 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 NOP53Q9NZM5 478 aaKnown RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 KCND2Q9NZV8 630 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 NYAP2Q9P242 653 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 DBR1Q9UK59 544 aaKnown RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 MTUS1Q9ULD2 1270 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 USP20Q9Y2K6 914 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 IGLV3-22A0A075B6J6 115 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 SFI1A8K8P3 1242 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 TCP11X1B4DZS4 312 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 P4HA2O15460 535 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 SLITRK3O94933 977 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 IMPDH2P12268 514 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 CCNB1P14635 433 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 BAG6P46379 1132 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 SLCO1A2P46721 670 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 RPS6KA3P51812 740 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 CCNG1P51959 295 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 MCCD1P59942 119 aaPredicted RBP9.1□□□□□ -0.95
VPS50-208ENST00000458707 MYO1EQ12965 1108 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 PPP2R5CQ13362 524 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 RRP1BQ14684 758 aaKnown RBP9.1□□□□□ -0.95
VPS50-208ENST00000458707 R3HDM1Q15032 1099 aaKnown RBP9.1□□□□□ -0.95
VPS50-208ENST00000458707 ARHGAP44Q17R89 818 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 MIGA2Q7L4E1 593 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 RPGRQ92834 1020 aaKnown RBP9.1□□□□□ -0.95
VPS50-208ENST00000458707 ARHGEF2Q92974 986 aaKnown RBP9.1□□□□□ -0.95
VPS50-208ENST00000458707 RXFP1Q9HBX9 757 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 SEPT11Q9NVA2 429 aaKnown RBP9.1□□□□□ -0.95
VPS50-208ENST00000458707 USP40Q9NVE5 1235 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 FGFR1OP2Q9NVK5 253 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 RGL1Q9NZL6 768 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 POLLQ9UGP5 575 aa9.1□□□□□ -0.95
VPS50-208ENST00000458707 ARL2BPQ9Y2Y0 163 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms