RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 ZNF564Q8TBZ8 553 aaPredicted RBP12.39□□□□□ -0.43
UBE2L3-202ENST00000458578 CKAP2Q8WWK9 683 aa12.39□□□□□ -0.43
UBE2L3-202ENST00000458578 PARVGQ9HBI0 331 aa12.39□□□□□ -0.43
UBE2L3-202ENST00000458578 GAKO14976 1311 aa12.39□□□□□ -0.43
UBE2L3-202ENST00000458578 GTPBP10A4D1E9 387 aaKnown RBP12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 DDX39AO00148 427 aaKnown RBP12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 BCRP11274 1271 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 ALADP13716 330 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 FOXN2P32314 431 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 EPC2Q52LR7 807 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 GPATCH4Q5T3I0 446 aaKnown RBP12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 SLFN13Q68D06 897 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 CROCCP2Q86T23 111 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 ANKLE1Q8NAG6 615 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 ZSWIM2Q8NEG5 633 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 SPIRE2Q8WWL2 714 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 SYT11Q9BT88 431 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 AGPAT3Q9NRZ7 376 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 UTRNP46939 3433 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 RASA4BC9J798 803 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 RASA4O43374 803 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 CBX6O95503 412 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 NT5C2P49902 561 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 IRX1P78414 480 aaPredicted RBP12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 SLC47A2Q86VL8 602 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 UTP4Q969X6 686 aaKnown RBP12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 NAALADL1Q9UQQ1 740 aa12.38□□□□□ -0.43
UBE2L3-202ENST00000458578 GOLGA8IPA6NC78 632 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 GOLGA8JA6NMD2 632 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 POC1B-GALNT4F8VUJ3 575 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 SSR1P43307 286 aaKnown RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 BFSP1Q12934 665 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 GRIK3Q13003 919 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 MFSD5Q6N075 450 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 DBNDD1Q9H9R9 158 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 COL5A3P25940 1745 aaPredicted RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 IGKV6D-41A0A0C4DH26 115 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 ENTPD5O75356 428 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 PIAS1O75925 651 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 UNC5CO95185 931 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 GJB6O95452 261 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 EYA4O95677 639 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 TTC4O95801 387 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 HSPA6P17066 643 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 CTCFP49711 727 aaPredicted RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 ERFP50548 548 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 RWDD2BP57060 319 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 LLGL2Q6P1M3 1020 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 TRMT10CQ7L0Y3 403 aaKnown RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 NOP9Q86U38 636 aaKnown RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 C4orf33Q8N1A6 199 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 TTC8Q8TAM2 541 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 LENG9Q96B70 501 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 SERPINB12Q96P63 405 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 NUDCD1Q96RS6 583 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 ANAPC5Q9UJX4 755 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 GYS1P13807 737 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 EPHB2P29323 1055 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 ATP5DP30049 168 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 PPP3CAQ08209 521 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 ZFYVE27Q5T4F4 411 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 ARHGEF18Q6ZSZ5 1173 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 ASRGL1Q7L266 308 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 FAM84AQ96KN4 292 aa12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 NAP1L4Q99733 375 aaKnown RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 ROPN1BQ9BZX4 212 aaPredicted RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 ROPN1Q9HAT0 212 aaPredicted RBP12.37□□□□□ -0.43
UBE2L3-202ENST00000458578 MAST2Q6P0Q8 1798 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 WDR91A4D1P6 747 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 DPPA5A6NC42 116 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 AP1G2O75843 785 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 LINGO3P0C6S8 592 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 GBP1P32455 592 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 NOVP48745 357 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 BMT2Q1RMZ1 405 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 TNFAIP8L3Q5GJ75 292 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 C11orf63Q6NUN7 778 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 CCDC127Q96BQ5 260 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 TMEM109Q9BVC6 243 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 KIAA1683Q9H0B3 1180 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 ZFATQ9P243 1243 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 FRMPD4Q14CM0 1322 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 DDTLA6NHG4 134 aaPredicted RBP12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 TP73O15350 636 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 SMIM24O75264 130 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 ATF2P15336 505 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 GM2AP17900 193 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 TAC1P20366 129 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 SSTR3P32745 418 aaPredicted RBP12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 TUBP50607 506 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 MTM1Q13496 603 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 BLMHQ13867 455 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 KIF22Q14807 665 aa12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 SIX1Q15475 284 aaPredicted RBP12.36□□□□□ -0.43
UBE2L3-202ENST00000458578 CERKLQ49MI3 558 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms