RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 AGTPBP1Q9UPW5 1226 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 ZNF148Q9UQR1 794 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 VWA5AO00534 786 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 XPOTO43592 962 aaKnown RBP17.42■□□□□ 0.38
LSS-205ENST00000457828 ALDH1A1P00352 501 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 RARBP10826 455 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 KCNJ1P48048 391 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 DRP2Q13474 957 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 LIN9Q5TKA1 542 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.42■□□□□ 0.38
LSS-205ENST00000457828 CALR3Q96L12 384 aaKnown RBP17.42■□□□□ 0.38
LSS-205ENST00000457828 LRRC37A3O60309 1634 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 CASP4P49662 377 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 TSNAXIP1Q2TAA8 658 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 VPS52Q8N1B4 723 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 PPFIBP2Q8ND30 876 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 HEMGNQ9BXL5 484 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 NACA2Q9H009 215 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 RIOX1Q9H6W3 641 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 TLR3O15455 904 aaKnown RBP17.42■□□□□ 0.38
LSS-205ENST00000457828 CYP11B2P19099 503 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
LSS-205ENST00000457828 RNF34Q969K3 372 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 MSTO1Q9BUK6 570 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 GDF3Q9NR23 364 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 DDX20Q9UHI6 824 aaKnown RBP17.42■□□□□ 0.38
LSS-205ENST00000457828 CAND2O75155 1236 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 FECHP22830 423 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 IL9RQ01113 521 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 ZC2HC1CQ53FD0 456 aaPredicted RBP17.41■□□□□ 0.38
LSS-205ENST00000457828 AGBL2Q5U5Z8 902 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 DCUN1D2Q6PH85 259 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 JAMLQ86YT9 394 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 RPUSD2Q8IZ73 545 aaKnown RBP17.41■□□□□ 0.38
LSS-205ENST00000457828 NOP53Q9NZM5 478 aaKnown RBP17.41■□□□□ 0.38
LSS-205ENST00000457828 PDXKO00764 312 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 EDRF1Q3B7T1 1238 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 RGMBQ6NW40 437 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 SCFD1Q8WVM8 642 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 C1orf54Q8WWF1 131 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 BAP1Q92560 729 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 RAB3IPQ96QF0 476 aaPredicted RBP17.41■□□□□ 0.38
LSS-205ENST00000457828 AFDNP55196 1824 aaKnown RBP17.41■□□□□ 0.38
LSS-205ENST00000457828 TCP11X1B4DZS4 312 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 H0Y3Z8 333 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 BRAFP15056 766 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 HSPA9P38646 679 aaKnown RBP17.41■□□□□ 0.38
LSS-205ENST00000457828 PHKA2P46019 1235 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 ZNF844Q08AG5 666 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 ARHGEF18Q6ZSZ5 1173 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 TRIM59Q8IWR1 403 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 KLRG1Q96E93 195 aa17.41■□□□□ 0.38
LSS-205ENST00000457828 INTS2Q9H0H0 1204 aaKnown RBP17.41■□□□□ 0.38
LSS-205ENST00000457828 PRDM5Q9NQX1 630 aaPredicted RBP17.41■□□□□ 0.38
LSS-205ENST00000457828 DENND3A2RUS2 1198 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 RSPH10B2B2RC85 870 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 CLDN3O15551 220 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 PJA2O43164 708 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 RSPH10BP0C881 870 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 YWHABP31946 246 aaKnown RBP17.4■□□□□ 0.38
LSS-205ENST00000457828 RWDD2BP57060 319 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 LONRF1Q17RB8 773 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 MUM1Q2TAK8 710 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 KIF2BQ8N4N8 673 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 LRRC8CQ8TDW0 803 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 MAIP1Q8WWC4 291 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 ERP44Q9BS26 406 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 FAM167BQ9BTA0 163 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 MIF4GDA9UHW6 222 aaKnown RBP17.4■□□□□ 0.38
LSS-205ENST00000457828 PON1P27169 355 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 PIK3CAP42336 1068 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 GPC5P78333 572 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 TAF11Q15544 211 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 GRK7Q8WTQ7 553 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 ZBED2Q9BTP6 218 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 NXF1Q9UBU9 619 aaKnown RBP17.4■□□□□ 0.38
LSS-205ENST00000457828 SUFUQ9UMX1 484 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 INPP5FQ9Y2H2 1132 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 SCTRP47872 440 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 TNFAIP2Q03169 654 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 KCNMA1Q12791 1236 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 PPIL2Q13356 520 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 XKR3Q5GH77 459 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 HP1BP3Q5SSJ5 553 aaPredicted RBP17.4■□□□□ 0.38
LSS-205ENST00000457828 ZNF662Q6ZS27 426 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 SMARCAD1Q9H4L7 1026 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■■■■ 55.4
LSS-205ENST00000457828 FAM187AA6NFU0 413 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 CHRNA3P32297 505 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 YWHAEP62258 255 aaKnown RBP17.4■□□□□ 0.38
LSS-205ENST00000457828 SARNPP82979 210 aaKnown RBP17.4■□□□□ 0.38
LSS-205ENST00000457828 ANKRD20A3Q5VUR7 823 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 FBXO25Q8TCJ0 367 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 PITPNM3Q9BZ71 974 aa17.4■□□□□ 0.38
LSS-205ENST00000457828 POLR3FQ9H1D9 316 aaPredicted RBP17.4■□□□□ 0.38
LSS-205ENST00000457828 WDR91A4D1P6 747 aa17.39■□□□□ 0.37
LSS-205ENST00000457828 KBTBD13C9JR72 458 aa17.39■□□□□ 0.37
LSS-205ENST00000457828 CTSHP09668 335 aa17.39■□□□□ 0.37
LSS-205ENST00000457828 SHROOM1Q2M3G4 852 aaPredicted RBP17.39■□□□□ 0.37
LSS-205ENST00000457828 FBXO16Q8IX29 292 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms