RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 NCOA4Q13772 614 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 HSP90AA5PQ58FG0 334 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 HABP4Q5JVS0 413 aaKnown RBP12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 SCG3Q8WXD2 468 aaKnown RBP12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 MAP3K14Q99558 947 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 TIPINQ9BVW5 301 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 ADAM33Q9BZ11 813 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 CD163L1Q9NR16 1453 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 SETBP1Q9Y6X0 1596 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 C19orf81C9J6K1 198 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 DYNC1LI2O43237 492 aaPredicted RBP12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 RECQLP46063 649 aaPredicted RBP12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 PPP4CP60510 307 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 FBXO28Q9NVF7 368 aa12.43□□□□□ -0.42
SMARCAD1-204ENST00000457823 PSMD14O00487 310 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 COPB2P35606 906 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 PIN4Q9Y237 131 aaKnown RBP12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 LCP1P13796 627 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 PDGFRAP16234 1089 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 FGFR4P22455 802 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 ACTR2P61160 394 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 COPS2P61201 443 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 KIAA1755Q5JYT7 1200 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 KRT80Q6KB66 452 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 AFG1LQ8WV93 481 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 TNIP3Q96KP6 325 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 LRRC37BQ96QE4 947 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 RIT2Q99578 217 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 MYO3AQ8NEV4 1616 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 TARSL2A2RTX5 802 aaKnown RBP12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 KIAA0391O15091 583 aaKnown RBP12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 TYK2P29597 1187 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 NOP14P78316 857 aaKnown RBP12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 LCA5Q86VQ0 697 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 IFT43Q96FT9 208 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 BTBD6Q96KE9 485 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 CCDC138Q96M89 665 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 MXRA8Q9BRK3 442 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 KCNH7Q9NS40 1196 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 SMARCAL1Q9NZC9 954 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 SUN2Q9UH99 717 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 TNPO2O14787 897 aaKnown RBP12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 RGS7P49802 495 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 KLK7P49862 253 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 EIF3EP60228 445 aaKnown RBP12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 MDM2Q00987 491 aaPredicted RBP12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 MXD4Q14582 209 aaPredicted RBP12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 KIF19Q2TAC6 998 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 MMS22LQ6ZRQ5 1243 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 CATSPER3Q86XQ3 398 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 ZNF560Q96MR9 790 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 UPF3AQ9H1J1 476 aaKnown RBP12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 GTSE1Q9NYZ3 720 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 UVRAGQ9P2Y5 699 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 HPCAL4Q9UM19 191 aa12.42□□□□□ -0.42
SMARCAD1-204ENST00000457823 KPNA7A9QM74 516 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 MAP3K7O43318 606 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 SPAG7O75391 227 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 NAB2Q15742 525 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 TADA2BQ86TJ2 420 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 NUDCD3Q8IVD9 361 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 PIP4K2CQ8TBX8 421 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 TGS1Q96RS0 853 aaKnown RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 DEFB129Q9H1M3 183 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 KCND2Q9NZV8 630 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 GUCY1A3Q02108 690 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 TAP1Q03518 808 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 NSUN2Q08J23 767 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 FOXD4Q12950 439 aaPredicted RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 SYCP2LQ5T4T6 812 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 NDUFAF2Q8N183 169 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 TRIM51Q9BSJ1 452 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 MAGEB5Q9BZ81 275 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 SMARCAD1Q9H4L7 1026 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 GGA3Q9NZ52 723 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 FAF1Q9UNN5 650 aaPredicted RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 MORC2Q9Y6X9 1032 aaPredicted RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 CROCC2H7BZ55 1655 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 CCDC195A0A1B0GUA6 201 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 SLC1A1P43005 524 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 SESN2P58004 480 aaPredicted RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 PRKCEQ02156 737 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 SAMD7Q7Z3H4 446 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 CDKL3Q8IVW4 592 aaPredicted RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 SH2D3CQ8N5H7 860 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 RBBP8NLQ8NC74 664 aaPredicted RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 ATG4CQ96DT6 458 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 C9orf72Q96LT7 481 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 SARS2Q9NP81 518 aaKnown RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 DIAPH2O60879 1101 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 EEF1B2P24534 225 aaKnown RBP12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 ESRRGP62508 458 aa12.41□□□□□ -0.42
SMARCAD1-204ENST00000457823 RPS6P62753 249 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms