RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 MIF4GDA9UHW6 222 aaKnown RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 O00370 1275 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PODXLO00592 558 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ATP2A1O14983 1001 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DDX3YO15523 660 aaKnown RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TTI1O43156 1089 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SLC37A4O43826 429 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ZBED4O75132 1171 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 OAS1P00973 400 aaKnown RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PLA2G4BP0C869 781 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SNHG28P0DPA3 235 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PDHBP11177 359 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TMOD1P28289 359 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ADORA2AP29274 412 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ATP5DP30049 168 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 STAT1P42224 750 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CLK2P49760 499 aaKnown RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PDE6CP51160 858 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CLNS1AP54105 237 aaKnown RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PMS2P54278 862 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SATB1Q01826 763 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CACNB2Q08289 660 aaPredicted RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ADAM9Q13443 819 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 LRRC41Q15345 812 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 EPHA7Q15375 998 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ZKSCAN8Q15776 578 aaPredicted RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 EXOC3L4Q17RC7 722 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TNFAIP8L3Q5GJ75 292 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 MFSD14CQ5VZR4 134 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 EPM2AIP1Q7L775 607 aaPredicted RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 KCNK18Q7Z418 384 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 APLFQ8IW19 511 aaPredicted RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 OR2W6PQ8NHA6 318 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CFAP61Q8NHU2 1237 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 NPLOC4Q8TAT6 608 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CHURC1Q8WUH1 139 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SCFD1Q8WVM8 642 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 MBOAT7Q96N66 472 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TEX13BQ9BXU2 312 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 BCCIPQ9P287 314 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ZNF214Q9UL59 606 aaPredicted RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CTDP1Q9Y5B0 961 aaPredicted RBP10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PARP14Q460N5 1801 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PFASO15067 1338 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 UBE4BO95155 1302 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SYNGAP1Q96PV0 1343 aa10.78□□□□□ -0.68
CHCHD4P3-201ENST00000455954 POTEMA6NI47 508 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PPP1R12AO14974 1030 aaPredicted RBP10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PLA2G6O60733 806 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RTN2O75298 545 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TDP2O95551 362 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 MMEP08473 750 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 FDX1P10109 184 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CHN1P15882 459 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 NR2F2P24468 414 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PON1P27169 355 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CHRNA3P32297 505 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 GBP2P32456 591 aaPredicted RBP10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SKIV2L2P42285 1042 aaKnown RBP10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 DR1Q01658 176 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 KCTD2Q14681 263 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TRPM8Q7Z2W7 1104 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 UBE2Q1Q7Z7E8 422 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 FAM160B2Q86V87 743 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 DDX42Q86XP3 938 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CEP57Q86XR8 500 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RHOT2Q8IXI1 618 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SLFN12Q8IYM2 578 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SLC30A5Q8TAD4 765 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 IFT74Q96LB3 600 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SCLT1Q96NL6 688 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PIGSQ96S52 555 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 MMP19Q99542 508 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 MKNK1Q9BUB5 465 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 AP1M1Q9BXS5 423 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SLC38A10Q9HBR0 1119 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 HOMER3Q9NSC5 361 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TYW1Q9NV66 732 aaKnown RBP10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 NOP53Q9NZM5 478 aaKnown RBP10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 FLRT1Q9NZU1 646 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 AMACRQ9UHK6 382 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 DDX25Q9UHL0 483 aaKnown RBP10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TRPC6Q9Y210 931 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 C15orf41Q9Y2V0 281 aa10.77□□□□□ -0.69
CHCHD4P3-201ENST00000455954 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CYP3A7-CYP3A51PA0A087WV96 503 aa10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PNMA6FA0A0J9YX94 578 aa10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 DDX3XO00571 662 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TBX3O15119 743 aa10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RGS16O15492 202 aaPredicted RBP10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 EDIL3O43854 480 aa10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 BUB1BO60566 1050 aaPredicted RBP10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PHF2O75151 1096 aa10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 FARP2O94887 1054 aaPredicted RBP10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 LUC7L3O95232 432 aaKnown RBP10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 IGHA2P01877 340 aa10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ALAS1P13196 640 aa10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 GAP43P17677 238 aa10.76□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CYP11B2P19099 503 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms