RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ABCD1P33897 745 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 NDUFV1P49821 464 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 SCNN1GP51170 649 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 RBM10P98175 930 aaKnown RBP19.03■□□□□ 0.64
USP39-208ENST00000455732 GRIK3Q13003 919 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 STRN3Q13033 797 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 CLUL1Q15846 466 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 SHC4Q6S5L8 630 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 ZPBP2Q6X784 338 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 SV2BQ7L1I2 683 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 TMC7Q7Z402 723 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 DDX53Q86TM3 631 aaKnown RBP19.03■□□□□ 0.64
USP39-208ENST00000455732 MRPL43Q8N983 215 aaKnown RBP19.03■□□□□ 0.64
USP39-208ENST00000455732 FIZ1Q96SL8 496 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 TARS2Q9BW92 718 aaKnown RBP19.03■□□□□ 0.64
USP39-208ENST00000455732 CDT1Q9H211 546 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 CD320Q9NPF0 282 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 MIOSQ9NXC5 875 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 CD207Q9UJ71 328 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 RECQL4O94761 1208 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 COASYQ13057 564 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 SMAD4Q13485 552 aaKnown RBP19.02■□□□□ 0.64
USP39-208ENST00000455732 SMC1AQ14683 1233 aaKnown RBP19.02■□□□□ 0.64
USP39-208ENST00000455732 SMAD2Q15796 467 aaKnown RBP19.02■□□□□ 0.64
USP39-208ENST00000455732 E2F4Q16254 413 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 TMEM184AQ6ZMB5 413 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 HAUS6Q7Z4H7 955 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 COLGALT2Q8IYK4 626 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 MYCT1Q8N699 235 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 FAM193BQ96PV7 902 aaPredicted RBP19.02■□□□□ 0.64
USP39-208ENST00000455732 VN1R3Q9BXE9 311 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 ZBP1Q9H171 429 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 CUEDC2Q9H467 287 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 SNTG2Q9NY99 539 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 STK39Q9UEW8 545 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 PARP2Q9UGN5 583 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 BARX2Q9UMQ3 279 aaPredicted RBP19.02■□□□□ 0.64
USP39-208ENST00000455732 PCDHA7Q9UN72 937 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 FAM50BQ9Y247 325 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 ATP6V1DQ9Y5K8 247 aa19.02■□□□□ 0.64
USP39-208ENST00000455732 C2orf71A6NGG8 1288 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 MYMKA6NI61 221 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 TRAK2O60296 914 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 TOM1L1O75674 476 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 MCF2P10911 925 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 ME1P48163 572 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 ZNF568Q3ZCX4 644 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 MPZL3Q6UWV2 235 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 VPS52Q8N1B4 723 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 SMRP1Q8NCR6 262 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 DDX12PQ92771 950 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 DNAJC19Q96DA6 116 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 RPS6KC1Q96S38 1066 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 ST6GALNAC4Q9H4F1 302 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 SEL1LQ9UBV2 794 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 RAPGEFL1Q9UHV5 662 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 IRAK3Q9Y616 596 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 CITO14578 2027 aa19.01■□□□□ 0.63
USP39-208ENST00000455732 K7ENM7 598 aa19■□□□□ 0.63
USP39-208ENST00000455732 NRP1O14786 923 aa19■□□□□ 0.63
USP39-208ENST00000455732 PIGRP01833 764 aa19■□□□□ 0.63
USP39-208ENST00000455732 ALDH2P05091 517 aa19■□□□□ 0.63
USP39-208ENST00000455732 CTSAP10619 480 aa19■□□□□ 0.63
USP39-208ENST00000455732 GRM5P41594 1212 aa19■□□□□ 0.63
USP39-208ENST00000455732 KRT85P78386 507 aa19■□□□□ 0.63
USP39-208ENST00000455732 PDILTQ8N807 584 aa19■□□□□ 0.63
USP39-208ENST00000455732 PANK2Q9BZ23 570 aa19■□□□□ 0.63
USP39-208ENST00000455732 TNMDQ9H2S6 317 aa19■□□□□ 0.63
USP39-208ENST00000455732 KLK14Q9P0G3 267 aa19■□□□□ 0.63
USP39-208ENST00000455732 PRKAG3Q9UGI9 489 aa19■□□□□ 0.63
USP39-208ENST00000455732 FAN1Q9Y2M0 1017 aa19■□□□□ 0.63
USP39-208ENST00000455732 FRMD3A2A2Y4 597 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 PTGESO14684 152 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 GAP43P17677 238 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 GTF2BQ00403 316 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 ZP2Q05996 745 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 MCL1Q07820 350 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 NOLC1Q14978 699 aaKnown RBP eCLIP18.99■□□□□ 0.63
USP39-208ENST00000455732 RESP18Q5W5W9 173 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 DYMQ7RTS9 669 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 MAP4K3Q8IVH8 894 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 GJD3Q8N144 294 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 IQUBQ8NA54 791 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 LEO1Q8WVC0 666 aaPredicted RBP18.99■□□□□ 0.63
USP39-208ENST00000455732 ZHX3Q9H4I2 956 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 MAGEF1Q9HAY2 307 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 KBTBD4Q9NVX7 518 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 MARCH5Q9NX47 278 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 TBX20Q9UMR3 447 aa18.99■□□□□ 0.63
USP39-208ENST00000455732 C19orf67A6NJJ6 358 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 NR1I2O75469 434 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 CXCL14O95715 111 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 EFEMP2O95967 443 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 BMS1Q14692 1282 aaKnown RBP18.98■□□□□ 0.63
USP39-208ENST00000455732 SFR1Q86XK3 245 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 CEP120Q8N960 986 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 AUTS2Q8WXX7 1259 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 KHSRPQ92945 711 aaKnown RBP eCLIP18.98■□□□□ 0.63
USP39-208ENST00000455732 PYM1Q9BRP8 204 aaKnown RBP18.98■□□□□ 0.63
USP39-208ENST00000455732 CCDC94Q9BW85 323 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms