RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 NAALADL2Q58DX5 795 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 ZBTB41Q5SVQ8 909 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 ZNF788Q6ZQV5 615 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 UBE2R2Q712K3 238 aaPredicted RBP3.32□□□□□ -1.88
LINC02540-201ENST00000455554 MAPKAPK5Q8IW41 473 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 GLB1L2Q8IW92 636 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 RHOT2Q8IXI1 618 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 TMEM132CQ8N3T6 1108 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 MDM1Q8TC05 714 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 ACTRT2Q8TDY3 377 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 FUBP1Q96AE4 644 aaKnown RBP3.32□□□□□ -1.88
LINC02540-201ENST00000455554 CLUHP3Q96NS8 147 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 CASS4Q9NQ75 786 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 PTCH2Q9Y6C5 1203 aa3.32□□□□□ -1.88
LINC02540-201ENST00000455554 WDR91A4D1P6 747 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 ITGA10O75578 1167 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 ELANEP08246 267 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 ATP2B1P20020 1258 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 RBM25P49756 843 aaKnown RBP3.31□□□□□ -1.88
LINC02540-201ENST00000455554 PROK1P58294 105 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 OCA2Q04671 838 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 RBL2Q08999 1139 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 FNDC3BQ53EP0 1204 aaKnown RBP3.31□□□□□ -1.88
LINC02540-201ENST00000455554 C2orf27AQ580R0 203 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 B3GNTL1Q67FW5 361 aaPredicted RBP3.31□□□□□ -1.88
LINC02540-201ENST00000455554 CDCA2Q69YH5 1023 aaPredicted RBP3.31□□□□□ -1.88
LINC02540-201ENST00000455554 ZNF425Q6IV72 752 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 PDZD4Q76G19 769 aaPredicted RBP3.31□□□□□ -1.88
LINC02540-201ENST00000455554 RNF31Q96EP0 1072 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 CEP95Q96GE4 821 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 PHACTR3Q96KR7 559 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 HEPHQ9BQS7 1158 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 KLHL11Q9NVR0 708 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 ASB6Q9NWX5 421 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 H2AFY2Q9P0M6 372 aaPredicted RBP3.31□□□□□ -1.88
LINC02540-201ENST00000455554 ARPP21Q9UBL0 812 aaPredicted RBP3.31□□□□□ -1.88
LINC02540-201ENST00000455554 MSRAQ9UJ68 235 aa3.31□□□□□ -1.88
LINC02540-201ENST00000455554 JMJD7P0C870 316 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 ATP2A2P16615 1042 aaKnown RBP3.3□□□□□ -1.88
LINC02540-201ENST00000455554 MEF2AQ02078 507 aaPredicted RBP3.3□□□□□ -1.88
LINC02540-201ENST00000455554 PPARAQ07869 468 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 C19orf54Q5BKX5 351 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 AKNAD1Q5T1N1 836 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 ATXN7L2Q5T6C5 722 aaPredicted RBP3.3□□□□□ -1.88
LINC02540-201ENST00000455554 TSHZ3Q63HK5 1081 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 PTF1AQ7RTS3 328 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 PASD1Q8IV76 773 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 EFHBQ8N7U6 833 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 BOD1Q96IK1 185 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 ZNF496Q96IT1 587 aaPredicted RBP3.3□□□□□ -1.88
LINC02540-201ENST00000455554 AIFM2Q9BRQ8 373 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 TANGO6Q9C0B7 1094 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 GALNT9Q9HCQ5 603 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 IL17RBQ9NRM6 502 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 TMEM74BQ9NUR3 256 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 GPRC5DQ9NZD1 345 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 ZKSCAN5Q9Y2L8 839 aa3.3□□□□□ -1.88
LINC02540-201ENST00000455554 A0A1B0GTW7 788 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 PRSS38A1L453 326 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 PJA2O43164 708 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 GASTP01350 101 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 POU3F3P20264 500 aaPredicted RBP3.29□□□□□ -1.88
LINC02540-201ENST00000455554 GTF2F1P35269 517 aaKnown RBP eCLIP3.29□□□□□ -1.88
LINC02540-201ENST00000455554 FLT3LGP49771 235 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 CLRN1P58418 232 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 CXADRP78310 365 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 GPR162Q16538 588 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 CFAP100Q494V2 611 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 MFSD14BQ5SR56 506 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 PRAMEF14Q5SWL7 426 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 KIAA1614Q5VZ46 1190 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 ABHD15Q6UXT9 468 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 FAM43AQ8N2R8 423 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 LILRB2Q8N423 598 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 SLC35B2Q8TB61 432 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 SNX33Q8WV41 574 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 WASF1Q92558 559 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 UROC1Q96N76 676 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 SRPK1Q96SB4 655 aaKnown RBP3.29□□□□□ -1.88
LINC02540-201ENST00000455554 ZSWIM1Q9BR11 485 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 HIRIP3Q9BW71 556 aaPredicted RBP3.29□□□□□ -1.88
LINC02540-201ENST00000455554 REXO4Q9GZR2 422 aaKnown RBP3.29□□□□□ -1.88
LINC02540-201ENST00000455554 EVLQ9UI08 416 aaPredicted RBP3.29□□□□□ -1.88
LINC02540-201ENST00000455554 DMTF1Q9Y222 760 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 NUMBLQ9Y6R0 609 aa3.29□□□□□ -1.88
LINC02540-201ENST00000455554 CCDC78A2IDD5 438 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 WIPF3A6NGB9 483 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 KCNAB3O43448 404 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 GAS7O60861 476 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 TMEM127O75204 238 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 RGS19P49795 217 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 MED25Q71SY5 747 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 THNSL2Q86YJ6 484 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 RSAD2Q8WXG1 361 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 DDB2Q92466 427 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 FUBP3Q96I24 572 aaKnown RBP eCLIP3.28□□□□□ -1.88
LINC02540-201ENST00000455554 ORAI3Q9BRQ5 295 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 RNPEPQ9H4A4 650 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 IFT57Q9NWB7 429 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 KCTD5Q9NXV2 234 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms