RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 NOLC1Q14978 699 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLCN1-203ENST00000455478 KMT5BQ4FZB7 885 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 SPOUT1Q5T280 376 aaKnown RBP16.08■□□□□ 0.16
CLCN1-203ENST00000455478 KANK3Q6NY19 840 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 THNSL1Q8IYQ7 743 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 COLGALT1Q8NBJ5 622 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 ZNF507Q8TCN5 953 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 URGCPQ8TCY9 931 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 GDPD5Q8WTR4 605 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 PLVAPQ9BX97 442 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 KANSL3Q9P2N6 904 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 ZMYM2Q9UBW7 1377 aa16.08■□□□□ 0.16
CLCN1-203ENST00000455478 MYO7AQ13402 2215 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 PTGESO14684 152 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 MEFVO15553 781 aaPredicted RBP16.07■□□□□ 0.16
CLCN1-203ENST00000455478 FAM189A1O60320 539 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 RPN1P04843 607 aaKnown RBP16.07■□□□□ 0.16
CLCN1-203ENST00000455478 HARSP12081 509 aaKnown RBP16.07■□□□□ 0.16
CLCN1-203ENST00000455478 LAG3P18627 525 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 PBX3P40426 434 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 SCNN1GP51170 649 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 OSTNP61366 133 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 UBE2HP62256 183 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 RNASELQ05823 741 aaKnown RBP16.07■□□□□ 0.16
CLCN1-203ENST00000455478 GPM6BQ13491 265 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 SEZ6Q53EL9 994 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 KCNT2Q6UVM3 1135 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 ALKAL1Q6UXT8 129 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 KLHL23Q8NBE8 558 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 P2RX5Q93086 422 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 CCDC94Q9BW85 323 aaPredicted RBP16.07■□□□□ 0.16
CLCN1-203ENST00000455478 SLC39A2Q9NP94 309 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 AAASQ9NRG9 546 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 DNAJB4Q9UDY4 337 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 PLAGL2Q9UPG8 496 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 EXOC7Q9UPT5 735 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 PCDHB12Q9Y5F1 795 aa16.07■□□□□ 0.16
CLCN1-203ENST00000455478 TDRD15B5MCY1 1934 aaKnown RBP16.07■□□□□ 0.16
CLCN1-203ENST00000455478 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
CLCN1-203ENST00000455478 CITO14578 2027 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 GRM6O15303 877 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 EIF3DO15371 548 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLCN1-203ENST00000455478 ITGB1P05556 798 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 POU3F3P20264 500 aaPredicted RBP16.06■□□□□ 0.16
CLCN1-203ENST00000455478 ADSSP30520 456 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 MATR3P43243 847 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLCN1-203ENST00000455478 BCAR1P56945 870 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 STK4Q13043 487 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 PSMD2Q13200 908 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 PNOCQ13519 176 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 POSTNQ15063 836 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 XKR4Q5GH76 650 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 ZBTB41Q5SVQ8 909 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 SLFN12LQ6IEE8 588 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 SCFD1Q8WVM8 642 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 ZNF558Q96NG5 402 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 ACAP3Q96P50 834 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 C11orf84Q9BUA3 381 aaPredicted RBP16.06■□□□□ 0.16
CLCN1-203ENST00000455478 GBP3Q9H0R5 595 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 EXOC1Q9NV70 894 aa16.06■□□□□ 0.16
CLCN1-203ENST00000455478 COL4A4P53420 1690 aaPredicted RBP16.05■□□□□ 0.16
CLCN1-203ENST00000455478 OGTO15294 1046 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 ZC3H11AO75152 810 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLCN1-203ENST00000455478 RHOBTB3O94955 611 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 GALTP07902 379 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 TNFSF9P41273 254 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 SLC11A1P49279 550 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 DSC1Q08554 894 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 NAB2Q15742 525 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 SLC10A6Q3KNW5 377 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 STXBP4Q6ZWJ1 553 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
CLCN1-203ENST00000455478 COLGALT2Q8IYK4 626 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 SYCP3Q8IZU3 236 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 KIAA0895Q8NCT3 520 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 SPPL3Q8TCT6 385 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 GAS2L1Q99501 681 aaPredicted RBP16.05■□□□□ 0.16
CLCN1-203ENST00000455478 MSTO1Q9BUK6 570 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 TMEM206Q9H813 350 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 ALG13Q9NP73 1137 aaKnown RBP16.05■□□□□ 0.16
CLCN1-203ENST00000455478 MTCH2Q9Y6C9 303 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 PLXNA4Q9HCM2 1894 aa16.05■□□□□ 0.16
CLCN1-203ENST00000455478 NT5C1B-RDH14C9J2C7 533 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 FGF18O76093 207 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 CLTAP09496 248 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 FOSL2P15408 326 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 IGFBP4P22692 258 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 DNAJB1P25685 340 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 ALDH7A1P49419 539 aaKnown RBP16.04■□□□□ 0.16
CLCN1-203ENST00000455478 YARSP54577 528 aaKnown RBP16.04■□□□□ 0.16
CLCN1-203ENST00000455478 PLCB3Q01970 1234 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 GRIK3Q13003 919 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 KCNB1Q14721 858 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 BMT2Q1RMZ1 405 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 SLC39A11Q8N1S5 342 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 CCDC34Q96HJ3 373 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 SNX27Q96L92 541 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 FAM193BQ96PV7 902 aaPredicted RBP16.04■□□□□ 0.16
CLCN1-203ENST00000455478 RPS6KC1Q96S38 1066 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms