RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 SLC39A4Q6P5W5 647 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 C6orf89Q6UWU4 347 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 RNF207Q6ZRF8 634 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 ANO5Q75V66 913 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 NLRX1Q86UT6 975 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 SLC13A5Q86YT5 568 aaPredicted RBP13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 CBWD2Q8IUF1 395 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 ZSWIM2Q8NEG5 633 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 ZNF564Q8TBZ8 553 aaPredicted RBP13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 UBLCP1Q8WVY7 318 aaPredicted RBP13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 KRT35Q92764 455 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 KAT5Q92993 513 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 ATP6V0A1Q93050 837 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 TRERF1Q96PN7 1200 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 RMDN3Q96TC7 470 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 SEPT11Q9NVA2 429 aaKnown RBP13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 RAB20Q9NX57 234 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 ZNF112Q9UJU3 913 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 STYXL1Q9Y6J8 313 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 BRCA1P38398 1863 aaKnown RBP13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 VWA5AO00534 786 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 MEFVO15553 781 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 DGAT1O75907 488 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 FSBPO95073 299 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 PIGRP01833 764 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 MYBL1P10243 752 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 EIF2AK2P19525 551 aaKnown RBP13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 PDE6CP51160 858 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 PTPROQ16827 1216 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 CLEC16AQ2KHT3 1053 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 NBPF9Q3BBW0 867 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 TNFAIP8L3Q5GJ75 292 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 SYDE1Q6ZW31 735 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 GPD1LQ8N335 351 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 MAIP1Q8WWC4 291 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 ART4Q93070 314 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 TRIM11Q96F44 468 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 CDHR1Q96JP9 859 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 CCT8L2Q96SF2 557 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 PLVAPQ9BX97 442 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 DPH5Q9H2P9 285 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 KMT5AQ9NQR1 393 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 ARHGAP28Q9P2N2 729 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 MTUS1Q9ULD2 1270 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 DENND3A2RUS2 1198 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 CCDC169A6NNP5 214 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 CYP26A1O43174 497 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 MMEP08473 750 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 KCNA2P16389 499 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 COILP38432 576 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 CDR1P51861 262 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 PMS2P54278 862 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 RWDD2BP57060 319 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 ZNF211Q13398 564 aaPredicted RBP13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 SLMAPQ14BN4 828 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 FAM102BQ5T8I3 360 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 PPP1R2P3Q6NXS1 205 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 MAEAQ7L5Y9 396 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 ZDHHC14Q8IZN3 488 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 PPM1KQ8N3J5 372 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 BSNDQ8WZ55 320 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 NUP85Q9BW27 656 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 GPRC5CQ9NQ84 441 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 TMOD4Q9NZQ9 345 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 PKD2L1Q9P0L9 805 aa13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 MTRF1LQ9UGC7 380 aaKnown RBP13.44□□□□□ -0.26
ECHDC1-209ENST00000454591 LCTP09848 1927 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 MYPNQ86TC9 1320 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 GMNCA6NCL1 334 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 ZNF862O60290 1169 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 PSAPP07602 524 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 NR3C2P08235 984 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 UNGP13051 313 aaPredicted RBP13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 RARGP13631 454 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 DPEP1P16444 411 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 MAN1A1P33908 653 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 SLC1A1P43005 524 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 MARCKSL1P49006 195 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 BPIFB4P59827 614 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 MESDQ14696 234 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 PSMD6Q15008 389 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 PLCB4Q15147 1175 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 KRT71Q3SY84 523 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 ARHGEF16Q5VV41 709 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 TTC27Q6P3X3 843 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 SV2AQ7L0J3 742 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 SLC47A2Q86VL8 602 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 CPXCR1Q8N123 301 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 OR2W6PQ8NHA6 318 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 P3H4Q92791 437 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 MAGOHBQ96A72 148 aaKnown RBP13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 ZNF653Q96CK0 615 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 CCDC134Q9H6E4 229 aa13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
ECHDC1-209ENST00000454591 EFCC1Q9HA90 598 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms