RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 SORCS3Q9UPU3 1222 aa20.44■□□□□ 0.86
UBE2D4-208ENST00000454350 SSX2IPQ9Y2D8 614 aa20.44■□□□□ 0.86
UBE2D4-208ENST00000454350 RECQL4O94761 1208 aa20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 PDGFBP01127 241 aaPredicted RBP20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 CENPBP07199 599 aaPredicted RBP20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 ASGR2P07307 311 aa20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 VCPP55072 806 aaKnown RBP20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 GNL2Q13823 731 aaKnown RBP20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 RABEP1Q15276 862 aa20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 RHOBTB2Q9BYZ6 727 aa20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 DDX19AQ9NUU7 478 aaKnown RBP20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 LIMD1Q9UGP4 676 aa20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 ADAM28Q9UKQ2 775 aa20.43■□□□□ 0.86
UBE2D4-208ENST00000454350 ADH1AP07327 375 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 CDC25AP30304 524 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 TUSC3Q13454 348 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 PPP2R5AQ15172 486 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 LILRA6Q6PI73 481 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 KCNK18Q7Z418 384 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 TDRD5Q8NAT2 981 aaKnown RBP20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 DEPTORQ8TB45 409 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 SNX29Q8TEQ0 813 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 KIFAP3Q92845 792 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 NOTCH4Q99466 2003 aa20.42■□□□□ 0.86
UBE2D4-208ENST00000454350 E9PMD0 336 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 N4BP1O75113 896 aaKnown RBP20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 NR1I2O75469 434 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 GLUD1P00367 558 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 C1RP00736 705 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 IGFBP6P24592 240 aaPredicted RBP20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 PRPHP41219 470 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 MAPK7Q13164 816 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 MTMR3Q13615 1198 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 HSP90AA2PQ14568 343 aaPredicted RBP20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 USP41Q3LFD5 358 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 RTP2Q5QGT7 225 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 UBALD2Q8IYN6 164 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 ZNF707Q96C28 371 aaPredicted RBP20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 TMX3Q96JJ7 454 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 FNIP2Q9P278 1114 aa20.41■□□□□ 0.86
UBE2D4-208ENST00000454350 CASTOR2A6NHX0 329 aa20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 LAD1O00515 517 aa20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 RFPL2O75678 378 aa20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 KIF4AO95239 1232 aa20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 LIG1P18858 919 aa20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 EFNA5P52803 228 aa20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 TAS1R3Q7RTX0 852 aa20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 PLCD3Q8N3E9 789 aa20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 RIN2Q8WYP3 895 aaPredicted RBP20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 RUSC1Q9BVN2 902 aa20.4■□□□□ 0.86
UBE2D4-208ENST00000454350 CCDC195A0A1B0GUA6 201 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 TGM5O43548 720 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 THP07101 528 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 SPATA31D3P0C874 917 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 MYBP10242 640 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 RPL17P18621 184 aaKnown RBP20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 NPTX2P47972 431 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 TCF15Q12870 199 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 PRSS55Q6UWB4 352 aaPredicted RBP20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 CD300LGQ6UXG3 332 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 SPATA31D4Q6ZUB0 917 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 CCDC149Q6ZUS6 474 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 C1orf186Q6ZWK4 172 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 ZBTB33Q86T24 672 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 ALYREFQ86V81 257 aaKnown RBP20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 PALB2Q86YC2 1186 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 SUGP1Q8IWZ8 645 aaKnown RBP20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 HASPINQ8TF76 798 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 HDAC7Q8WUI4 952 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 IFT74Q96LB3 600 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 PTPRHQ9HD43 1115 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 ARHGAP28Q9P2N2 729 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 STK24Q9Y6E0 443 aa20.39■□□□□ 0.85
UBE2D4-208ENST00000454350 TADA2AO75478 443 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 AVPR2P30518 371 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 PEX3P56589 373 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 ATP2C1P98194 919 aaPredicted RBP20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 DCAF4L1Q3SXM0 396 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 HYIQ5T013 277 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 ATF7IP2Q5U623 682 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 RINT1Q6NUQ1 792 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 CYP26C1Q6V0L0 522 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 PNMA5Q96PV4 448 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 PPP1R10Q96QC0 940 aaKnown RBP20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 ADPGKQ9BRR6 497 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 RAB34Q9BZG1 259 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 WDR6Q9NNW5 1121 aaKnown RBP20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 DNM3Q9UQ16 869 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 GDAQ9Y2T3 454 aa20.38■□□□□ 0.85
UBE2D4-208ENST00000454350 SF3B1O75533 1304 aaKnown RBP eCLIP20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 ABLIM1O14639 778 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 HIP1RO75146 1068 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 KRT79Q5XKE5 535 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 DTHD1Q6ZMT9 781 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 OTOP3Q7RTS5 596 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 GLYCTKQ8IVS8 523 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 CEP120Q8N960 986 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 LNX1Q8TBB1 728 aaPredicted RBP20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 PIK3R5Q8WYR1 880 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms