RNA–Protein interactions for RNA: ENST00000454220.6

PPP2R1A-203, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 1 (best)

Gene PPP2R1A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-203ENST00000454220 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 SLFN12LQ6IEE8 588 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 SLC39A4Q6P5W5 647 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 AGMOQ6ZNB7 445 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 CMTR2Q8IYT2 770 aaKnown RBP17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 SYCP3Q8IZU3 236 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 ZBTB45Q96K62 511 aaPredicted RBP17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 NXF3Q9H4D5 531 aaKnown RBP17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 GIT1Q9Y2X7 761 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 COL4A6Q14031 1691 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 RALGAPA2Q2PPJ7 1873 aa17.03■□□□□ 0.32
PPP2R1A-203ENST00000454220 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 LINC01553A4QN01 128 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 FGFR1P11362 822 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 HOXD13P35453 343 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 KYAT1Q16773 422 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 CLLU1OSQ5K130 101 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 GLB1LQ6UWU2 654 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 ZBTB33Q86T24 672 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 ABI1Q8IZP0 508 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 KIAA0895Q8NCT3 520 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 SCFD1Q8WVM8 642 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 LPPQ93052 612 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 CASD1Q96PB1 797 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 RSAD1Q9HA92 442 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 ANKFY1Q9P2R3 1169 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 COG5Q9UP83 839 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 HES2Q9Y543 173 aa17.02■□□□□ 0.32
PPP2R1A-203ENST00000454220 A0A0B4J269 797 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 TBKBP1A7MCY6 615 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 MEIS3P2A8K0S8 358 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 ANKRD63C9JTQ0 380 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 INPPL1O15357 1258 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 OFD1O75665 1012 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 KIF20AO95235 890 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 MBD3O95983 291 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 GRM5P41594 1212 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 MATR3P43243 847 aaKnown RBP eCLIP17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 SNRPFP62306 86 aaKnown RBP17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 BTG3Q14201 252 aaPredicted RBP17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 HELQQ8TDG4 1101 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 HLA-CQ95604 372 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 TGS1Q96RS0 853 aaKnown RBP17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 HAPLN2Q9GZV7 340 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 GBP3Q9H0R5 595 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 CLSTN2Q9H4D0 955 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 SNTG2Q9NY99 539 aa17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
PPP2R1A-203ENST00000454220 OGTO15294 1046 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 GARTP22102 1010 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 GATMP50440 423 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 ERVK-21P61565 698 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 KNOP1Q1ED39 458 aaKnown RBP17■□□□□ 0.31
PPP2R1A-203ENST00000454220 NOMO2Q5JPE7 1267 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 FIBCD1Q8N539 461 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 GPT2Q8TD30 523 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 ERCC4Q92889 916 aaPredicted RBP17■□□□□ 0.31
PPP2R1A-203ENST00000454220 CCDC94Q9BW85 323 aaPredicted RBP17■□□□□ 0.31
PPP2R1A-203ENST00000454220 APOL6Q9BWW8 343 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 MRPL9Q9BYD2 267 aaKnown RBP17■□□□□ 0.31
PPP2R1A-203ENST00000454220 KANSL3Q9P2N6 904 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 PARP2Q9UGN5 583 aa17■□□□□ 0.31
PPP2R1A-203ENST00000454220 CITO14578 2027 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 MYO7AQ13402 2215 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 ARL5CA6NH57 179 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 RECQL4O94761 1208 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 CLTAP09496 248 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 AKAP5P24588 427 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 ADSSP30520 456 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 POU5F1Q01860 360 aaKnown RBP16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 CAMK4Q16566 473 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 PAN2Q504Q3 1202 aaKnown RBP16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 COBLL1Q53SF7 1204 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 ZNF658Q5TYW1 1059 aaPredicted RBP16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 HS2ST1Q7LGA3 356 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 THNSL1Q8IYQ7 743 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 GUF1Q8N442 669 aaKnown RBP16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 GOLGA5Q8TBA6 731 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 URGCPQ8TCY9 931 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 POMGNT1Q8WZA1 660 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 CLP1Q92989 425 aaKnown RBP16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 ACAP3Q96P50 834 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 MSTO1Q9BUK6 570 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 NUP62CLQ9H1M0 184 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 IKZF4Q9H2S9 585 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 LMCD1Q9NZU5 365 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 KIAA1468Q9P260 1216 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 AGO2Q9UKV8 859 aaKnown RBP16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 GDAQ9Y2T3 454 aa16.99■□□□□ 0.31
PPP2R1A-203ENST00000454220 TRIP11Q15643 1979 aa16.98■□□□□ 0.31
PPP2R1A-203ENST00000454220 TISP43B9A030 160 aa16.98■□□□□ 0.31
PPP2R1A-203ENST00000454220 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
PPP2R1A-203ENST00000454220 TGFB1I1O43294 461 aa16.98■□□□□ 0.31
PPP2R1A-203ENST00000454220 FAM189A1O60320 539 aa16.98■□□□□ 0.31
PPP2R1A-203ENST00000454220 HARSP12081 509 aaKnown RBP16.98■□□□□ 0.31
PPP2R1A-203ENST00000454220 PTMSP20962 102 aa16.98■□□□□ 0.31
PPP2R1A-203ENST00000454220 YARSP54577 528 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms