RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 KRT31Q15323 416 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 TTC31Q49AM3 519 aaPredicted RBP17.19■□□□□ 0.34
SNX17-204ENST00000453453 RSPH3Q86UC2 560 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 IRF2BP1Q8IU81 584 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 SLC9A9Q8IVB4 645 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 EFCAB13Q8IY85 973 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 NME8Q8N427 588 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 PPP1R13LQ8WUF5 828 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 EEF2KMTQ96G04 330 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 MRPL4Q9BYD3 311 aaKnown RBP17.19■□□□□ 0.34
SNX17-204ENST00000453453 ABHD10Q9NUJ1 306 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 VGLL3A8MV65 326 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 INO80B-WBP1J3KQ70 363 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 PRKCBP05771 671 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 GPC3P51654 580 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 COPB1P53618 953 aaKnown RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 NLRP11P59045 1033 aaKnown RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 ITGA7Q13683 1181 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 RUFY4Q6ZNE9 571 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 TAS1R3Q7RTX0 852 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 DEFB118Q96PH6 123 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 INO80BQ9C086 356 aaPredicted RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 METTL14Q9HCE5 456 aaKnown RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 PRMT7Q9NVM4 692 aaPredicted RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 LCMT1Q9UIC8 334 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 A0A087WZ62 844 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 PES1O00541 588 aaKnown RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 N4BP3O15049 544 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 EXOC3O60645 756 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 MYCP01106 439 aaPredicted RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 PIGRP01833 764 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 CASP14P31944 242 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 PSMC2P35998 433 aaKnown RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 PDE4CQ08493 712 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 TMEM132AQ24JP5 1023 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 SLFN12LQ6IEE8 588 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 IQCEQ6IPM2 695 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 ZPBP2Q6X784 338 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 TMEM174Q8WUU8 243 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 DNAJB3Q8WWF6 145 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 POMGNT1Q8WZA1 660 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 FDXACB1Q9BRP7 624 aaPredicted RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 TUBGCP2Q9BSJ2 902 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 MKNK1Q9BUB5 465 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 SEZ6LQ9BYH1 1024 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 GCOM2Q9BZD3 368 aaPredicted RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 IRX2Q9BZI1 471 aaPredicted RBP17.18■□□□□ 0.34
SNX17-204ENST00000453453 CCDC113Q9H0I3 377 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 TAB2Q9NYJ8 693 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 PHF24Q9UPV7 400 aa17.18■□□□□ 0.34
SNX17-204ENST00000453453 M0QZ92 97 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 DNM1LO00429 736 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 KIAA0391O15091 583 aaKnown RBP17.17■□□□□ 0.34
SNX17-204ENST00000453453 SHOX2O60902 331 aaPredicted RBP17.17■□□□□ 0.34
SNX17-204ENST00000453453 GARTP22102 1010 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 MATR3P43243 847 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX17-204ENST00000453453 GYS2P54840 703 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 ZNF200P98182 395 aaPredicted RBP17.17■□□□□ 0.34
SNX17-204ENST00000453453 MBTD1Q05BQ5 628 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 MTFR1Q15390 333 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 PAPD7Q5XG87 772 aaKnown RBP17.17■□□□□ 0.34
SNX17-204ENST00000453453 ICE2Q659A1 982 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 GDF6Q6KF10 455 aaPredicted RBP17.17■□□□□ 0.34
SNX17-204ENST00000453453 LRRC31Q6UY01 552 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 FRMD5Q7Z6J6 570 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 FAM186BQ8IYM0 893 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 XXYLT1Q8NBI6 393 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 ZNF668Q96K58 619 aaPredicted RBP17.17■□□□□ 0.34
SNX17-204ENST00000453453 PPP1R16BQ96T49 567 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 NOC4LQ9BVI4 516 aaKnown RBP17.17■□□□□ 0.34
SNX17-204ENST00000453453 IKZF4Q9H2S9 585 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 STARD7Q9NQZ5 370 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 DMAC2Q9NW81 257 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 HSPBP1Q9NZL4 362 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 ARMCX3Q9UH62 379 aaPredicted RBP17.17■□□□□ 0.34
SNX17-204ENST00000453453 NOD1Q9Y239 953 aa17.17■□□□□ 0.34
SNX17-204ENST00000453453 PCNTO95613 3336 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 A0A1W2PQ45 241 aaPredicted RBP17.16■□□□□ 0.34
SNX17-204ENST00000453453 A0A1W2PQC6 194 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 A0A1W2PQY0 241 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 ANO9A1A5B4 782 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 A6NNZ2 444 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 ANKRD63C9JTQ0 380 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 ACKR2O00590 384 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 TRIM66O15016 1216 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 CLSTN1O94985 981 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 FXR1P51114 621 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNX17-204ENST00000453453 MARSP56192 900 aaKnown RBP17.16■□□□□ 0.34
SNX17-204ENST00000453453 PRPF4BQ13523 1007 aaKnown RBP17.16■□□□□ 0.34
SNX17-204ENST00000453453 HIC1Q14526 733 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 MAN2A1Q16706 1144 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 PTPN21Q16825 1174 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 TUBB8Q3ZCM7 444 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 VPS16Q9H269 839 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 FZD8Q9H461 694 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 PCIF1Q9H4Z3 704 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 IFT122Q9HBG6 1241 aa17.16■□□□□ 0.34
SNX17-204ENST00000453453 EIF3CLB5ME19 914 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms