RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
VPS33A-202ENST00000451053 KLK14Q9P0G3 267 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 PARP2Q9UGN5 583 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 AGO2Q9UKV8 859 aaKnown RBP14.22□□□□□ -0.13
VPS33A-202ENST00000451053 GBF1Q92538 1859 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.21□□□□□ -0.13
VPS33A-202ENST00000451053 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.21□□□□□ -0.13
VPS33A-202ENST00000451053 LCHNA4D1U4 455 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 GOLGA8IPA6NC78 632 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 GOLGA8JA6NMD2 632 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 TBKBP1A7MCY6 615 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 PDXKO00764 312 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 MEFVO15553 781 aaPredicted RBP14.21□□□□□ -0.13
VPS33A-202ENST00000451053 TLL1O43897 1013 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 PBX2P40425 430 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 MLH1P40692 756 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 AFF1P51825 1210 aaKnown RBP14.21□□□□□ -0.13
VPS33A-202ENST00000451053 GSE1Q14687 1217 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 ANO6Q4KMQ2 910 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 PAN2Q504Q3 1202 aaKnown RBP14.21□□□□□ -0.13
VPS33A-202ENST00000451053 ZCWPW2Q504Y3 356 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 HACE1Q8IYU2 909 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 CASD1Q96PB1 797 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 YME1L1Q96TA2 773 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 GAD1Q99259 594 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 RAD9AQ99638 391 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 CCDC94Q9BW85 323 aaPredicted RBP14.21□□□□□ -0.13
VPS33A-202ENST00000451053 TMEM117Q9H0C3 514 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 HSPBP1Q9NZL4 362 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 INPP5FQ9Y2H2 1132 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 YBX2Q9Y2T7 364 aaKnown RBP14.21□□□□□ -0.13
VPS33A-202ENST00000451053 GIT1Q9Y2X7 761 aa14.21□□□□□ -0.13
VPS33A-202ENST00000451053 ARL5CA6NH57 179 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 HOXA2O43364 376 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 OFD1O75665 1012 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 CLTAP09496 248 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 ACOT2P49753 483 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 CYP2J2P51589 502 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 PMS1P54277 932 aaKnown RBP14.2□□□□□ -0.14
VPS33A-202ENST00000451053 SNRPFP62306 86 aaKnown RBP14.2□□□□□ -0.14
VPS33A-202ENST00000451053 DPCR1Q3MIW9 517 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 KLHL10Q6JEL2 608 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 GLB1LQ6UWU2 654 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 CRELD2Q6UXH1 353 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-202ENST00000451053 GOLGA5Q8TBA6 731 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 FAM200AQ8TCP9 573 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
VPS33A-202ENST00000451053 SNX27Q96L92 541 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 ZFP42Q96MM3 310 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 ACAP3Q96P50 834 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 BPIFA3Q9BQP9 254 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 FAM213AQ9BRX8 229 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 PBX4Q9BYU1 374 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 DNAJC25Q9H1X3 360 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 MIOSQ9NXC5 875 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 CGNQ9P2M7 1197 aaKnown RBP14.2□□□□□ -0.14
VPS33A-202ENST00000451053 HCSTQ9UBK5 93 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 CPSF3Q9UKF6 684 aaKnown RBP14.2□□□□□ -0.14
VPS33A-202ENST00000451053 CTNND2Q9UQB3 1225 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 TRAF3IP3Q9Y228 551 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 INSL6Q9Y581 213 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 PCDHA11Q9Y5I1 949 aa14.2□□□□□ -0.14
VPS33A-202ENST00000451053 FNDC1Q4ZHG4 1894 aaPredicted RBP14.2□□□□□ -0.14
VPS33A-202ENST00000451053 TRIM49BA6NDI0 452 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 PSMA7O14818 248 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 INPPL1O15357 1258 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 CALUO43852 315 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-202ENST00000451053 EXTL3O43909 919 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 ARHGEF15O94989 841 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 NR3C1P04150 777 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 CXCL8P10145 99 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 ZNF165P49910 485 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 SCNN1GP51170 649 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 YARSP54577 528 aaKnown RBP14.19□□□□□ -0.14
VPS33A-202ENST00000451053 ENOX2Q16206 610 aaKnown RBP14.19□□□□□ -0.14
VPS33A-202ENST00000451053 KYAT1Q16773 422 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 SLC10A6Q3KNW5 377 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 LRIT3Q3SXY7 679 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 NOMO2Q5JPE7 1267 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 CENPPQ6IPU0 288 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 C12orf56Q8IXR9 622 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 CMTR2Q8IYT2 770 aaKnown RBP14.19□□□□□ -0.14
VPS33A-202ENST00000451053 ABI1Q8IZP0 508 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 GPD1LQ8N335 351 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 GSTCDQ8NEC7 633 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-202ENST00000451053 NELFBQ8WX92 580 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 P2RX5Q93086 422 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 DHTKD1Q96HY7 919 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-202ENST00000451053 UBN1Q9NPG3 1134 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 PLAGL2Q9UPG8 496 aa14.19□□□□□ -0.14
VPS33A-202ENST00000451053 GOLGA6L3A6NEY3 463 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 PTGESO14684 152 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 KIAA0391O15091 583 aaKnown RBP14.18□□□□□ -0.14
VPS33A-202ENST00000451053 LDHAP00338 332 aaKnown RBP14.18□□□□□ -0.14
VPS33A-202ENST00000451053 CA3P07451 260 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 ADRB2P07550 413 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 CCNE1P24864 410 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 ERCC5P28715 1186 aaPredicted RBP14.18□□□□□ -0.14
VPS33A-202ENST00000451053 WNT7BP56706 349 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms