RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CYP24A1Q07973 514 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 FILIP1LQ4L180 1135 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 CRELD2Q6UXH1 353 aaPredicted RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 INTS8Q75QN2 995 aaKnown RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 TRIM59Q8IWR1 403 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 TMEM192Q8IY95 271 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 CCDC127Q96BQ5 260 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 CCDC51Q96ER9 411 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 ABHD8Q96I13 439 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 NAP1L5Q96NT1 182 aaPredicted RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 MMRN2Q9H8L6 949 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 SQORQ9Y6N5 450 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 TRIP11Q15643 1979 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 MAPK13O15264 365 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 NBNO60934 754 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 STAG3L1P0CL83 205 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 HSP90AA2PQ14568 343 aaPredicted RBP15.91■□□□□ 0.14
TNF-208ENST00000449264 PTPN21Q16825 1174 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 FAM212AQ96EL1 285 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 BORCS6Q96GS4 357 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 APOL6Q9BWW8 343 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 TMX1Q9H3N1 280 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 NXF3Q9H4D5 531 aaKnown RBP15.91■□□□□ 0.14
TNF-208ENST00000449264 CPSF3Q9UKF6 684 aaKnown RBP15.91■□□□□ 0.14
TNF-208ENST00000449264 HES2Q9Y543 173 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 RALGAPA2Q2PPJ7 1873 aa15.91■□□□□ 0.14
TNF-208ENST00000449264 A0A1B0GTH6 734 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 CBFA2T2O43439 604 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 MGEA5O60502 916 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 ADCY5O95622 1261 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 TPM3P06753 285 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 CXCL8P10145 99 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 DLATP10515 647 aaKnown RBP15.9■□□□□ 0.14
TNF-208ENST00000449264 VAMP7P51809 220 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 ZNF75DP51815 510 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 DLG4P78352 724 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 VWA3BQ502W6 1294 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 MIIPQ5JXC2 388 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 UBXN11Q5T124 520 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 BRSK2Q8IWQ3 736 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 PLEKHO2Q8TD55 490 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 ANP32BQ92688 251 aaKnown RBP15.9■□□□□ 0.14
TNF-208ENST00000449264 CHST12Q9NRB3 414 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 PCDH10Q9P2E7 1040 aa15.9■□□□□ 0.14
TNF-208ENST00000449264 LGALS16A8MUM7 142 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 WNT7BP56706 349 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 ENOX2Q16206 610 aaKnown RBP15.89■□□□□ 0.13
TNF-208ENST00000449264 DEFB128Q7Z7B8 93 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 SLC35C1Q96A29 364 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 MFSD14AQ96MC6 490 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 FNBP1Q96RU3 617 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 CCDC94Q9BW85 323 aaPredicted RBP15.89■□□□□ 0.13
TNF-208ENST00000449264 NDST4Q9H3R1 872 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 RPF1Q9H9Y2 349 aaKnown RBP15.89■□□□□ 0.13
TNF-208ENST00000449264 PDE11AQ9HCR9 933 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 INTS13Q9NVM9 706 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 SNTG2Q9NY99 539 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 IPPQ9Y573 584 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 TRIM43BA6NCK2 446 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 LRRC10BA6NIK2 292 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 CCDC85CA6NKD9 419 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 LRRIQ3A6PVS8 624 aaPredicted RBP15.89■□□□□ 0.13
TNF-208ENST00000449264 TEX33O43247 280 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 CLTAP09496 248 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 GRM5P41594 1212 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 UBXN1Q04323 297 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 KCNH2Q12809 1159 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 GPNMBQ14956 572 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 PSMD6Q15008 389 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 KYAT1Q16773 422 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 LMBRD2Q68DH5 695 aaPredicted RBP15.89■□□□□ 0.13
TNF-208ENST00000449264 USP37Q86T82 979 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 TRIM43Q96BQ3 446 aaPredicted RBP15.89■□□□□ 0.13
TNF-208ENST00000449264 FAM84AQ96KN4 292 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 ACAP3Q96P50 834 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 POP1Q99575 1024 aaKnown RBP15.89■□□□□ 0.13
TNF-208ENST00000449264 ADAM2Q99965 735 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 RTN4Q9NQC3 1192 aaKnown RBP15.89■□□□□ 0.13
TNF-208ENST00000449264 TOPORSQ9NS56 1045 aaPredicted RBP15.89■□□□□ 0.13
TNF-208ENST00000449264 FAM105AQ9NUU6 356 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 PCDHB2Q9Y5E7 798 aa15.89■□□□□ 0.13
TNF-208ENST00000449264 AFPP02771 609 aaKnown RBP15.88■□□□□ 0.13
TNF-208ENST00000449264 RAG1P15918 1043 aa15.88■□□□□ 0.13
TNF-208ENST00000449264 AKAP5P24588 427 aa15.88■□□□□ 0.13
TNF-208ENST00000449264 PPP2R3AQ06190 1150 aa15.88■□□□□ 0.13
TNF-208ENST00000449264 FKBP15Q5T1M5 1219 aa15.88■□□□□ 0.13
TNF-208ENST00000449264 DBF4BQ8NFT6 615 aa15.88■□□□□ 0.13
TNF-208ENST00000449264 PARD3BQ8TEW8 1205 aa15.88■□□□□ 0.13
TNF-208ENST00000449264 RECQL4O94761 1208 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 TIMP1P01033 207 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 TNNI1P19237 187 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 ITGB8P26012 769 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 GCLMP48507 274 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 YARSP54577 528 aaKnown RBP15.87■□□□□ 0.13
TNF-208ENST00000449264 DSC3Q14574 896 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 NR1I3Q14994 352 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 PLEKHG4Q58EX7 1191 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 C1orf220Q5T0J3 134 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 C7orf61Q8IZ16 206 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 RNF169Q8NCN4 708 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms