RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 ATP2A2P16615 1042 aaKnown RBP9.02□□□□□ -0.96
CPSF7-206ENST00000448745 FGFR4P22455 802 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 RPA1P27694 616 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 HOXD13P35453 343 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 MSH2P43246 934 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 FMO5P49326 533 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 SUPT20HL1Q3ZLR7 823 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 CCDC38Q502W7 563 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 CAPRIN2Q6IMN6 1127 aaKnown RBP9.02□□□□□ -0.96
CPSF7-206ENST00000448745 GJB7Q6PEY0 223 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 POTEGQ6S5H5 508 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 DNAAF5Q86Y56 855 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 CLEC10AQ8IUN9 316 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 ADGRF4Q8IZF3 695 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 LRRC47Q8N1G4 583 aaKnown RBP9.02□□□□□ -0.96
CPSF7-206ENST00000448745 PRELID2Q8N945 189 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 C12orf50Q8NA57 414 aaPredicted RBP9.02□□□□□ -0.96
CPSF7-206ENST00000448745 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.02□□□□□ -0.96
CPSF7-206ENST00000448745 FBF1Q8TES7 1133 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 CKAP2Q8WWK9 683 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 C18orf8Q96DM3 657 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 ARHGEF26Q96DR7 871 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 AGPAT1Q99943 283 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 ANO3Q9BYT9 981 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 INTS2Q9H0H0 1204 aaKnown RBP9.02□□□□□ -0.96
CPSF7-206ENST00000448745 RNF39Q9H2S5 420 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 SEMA4AQ9H3S1 761 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 SPATS2LQ9NUQ6 558 aaKnown RBP9.02□□□□□ -0.96
CPSF7-206ENST00000448745 SLC5A4Q9NY91 659 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 WHRNQ9P202 907 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.02□□□□□ -0.96
CPSF7-206ENST00000448745 CLEC11AQ9Y240 323 aa9.02□□□□□ -0.96
CPSF7-206ENST00000448745 TRPM7Q96QT4 1865 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 SMNDC1O75940 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 MTA2O94776 668 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 GDF11O95390 407 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 ECEL1O95672 775 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CCNB1P14635 433 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 MAN1A1P33908 653 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 COILP38432 576 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CAP2P40123 477 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CAV1Q03135 178 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 PABPC4Q13310 644 aaKnown RBP eCLIP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 ACVR2BQ13705 512 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 C11orf91Q3C1V1 193 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CERKLQ49MI3 558 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 Q4G0T1 1027 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CMPK2Q5EBM0 449 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CDCA2Q69YH5 1023 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CHADLQ6NUI6 762 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CCDC137Q6PK04 289 aaKnown RBP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 PPP1R21Q6ZMI0 780 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CEP128Q6ZU80 1094 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 SYDE1Q6ZW31 735 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 MOB2Q70IA6 237 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 ASRGL1Q7L266 308 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 ADAT2Q7Z6V5 191 aaKnown RBP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 EXOC3L1Q86VI1 746 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 ALG3Q92685 438 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 ARHGEF2Q92974 986 aaKnown RBP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 SPDL1Q96EA4 605 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 SAAL1Q96ER3 474 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 BORCS6Q96GS4 357 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CCDC17Q96LX7 622 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 MAGEB18Q96M61 343 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 ZNF570Q96NI8 536 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 THAP2Q9H0W7 228 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 SLC24A3Q9HC58 644 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 OLFML3Q9NRN5 406 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 SEPT11Q9NVA2 429 aaKnown RBP9.02□□□□□ -0.97
CPSF7-206ENST00000448745 FGFR1OP2Q9NVK5 253 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 NKIRAS1Q9NYS0 192 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 CTTNBP2NLQ9P2B4 639 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 KLHL14Q9P2G3 628 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 PCDHB13Q9Y5F0 798 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 ALG6Q9Y672 507 aa9.02□□□□□ -0.97
CPSF7-206ENST00000448745 TMEM120BA0PK00 339 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 ABLIM1O14639 778 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 PPP1R11O60927 126 aaPredicted RBP9.01□□□□□ -0.97
CPSF7-206ENST00000448745 FAM13AO94988 1023 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 EYA4O95677 639 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 GH2P01242 217 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 KRT16P08779 473 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 BCRP11274 1271 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 STX2P32856 288 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 COPB2P35606 906 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 STAT3P40763 770 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 SLCO1A2P46721 670 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 CASP4P49662 377 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 GPC5P78333 572 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 MYL7Q01449 175 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 STRN3Q13033 797 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 BLMHQ13867 455 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 PARP6Q2NL67 630 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 CST9Q5W186 159 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 NUGGCQ68CJ6 796 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 ARHGEF18Q6ZSZ5 1173 aa9.01□□□□□ -0.97
CPSF7-206ENST00000448745 INTS8Q75QN2 995 aaKnown RBP9.01□□□□□ -0.97
CPSF7-206ENST00000448745 CATSPER3Q86XQ3 398 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms