RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ZBTB45Q96K62 511 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 RPS6KC1Q96S38 1066 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 CDT1Q9H211 546 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 DAXXQ9UER7 740 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 CD207Q9UJ71 328 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 BARX2Q9UMQ3 279 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 PRG3Q9Y2Y8 225 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 IRAK3Q9Y616 596 aa13.99□□□□□ -0.17
PRPF40A-203ENST00000448428 A0A087X0B3 334 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 MBTPS2O43462 519 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 CLASP2O75122 1294 aaKnown RBP13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 PPP6R2O75170 966 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 NR1I2O75469 434 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 FAM13AO94988 1023 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 EFEMP2O95967 443 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 THP07101 528 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 PROZP22891 400 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 CA8P35219 290 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 TXLNAP40222 546 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 ZNF131P52739 623 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 COASYQ13057 564 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 NAB2Q15742 525 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 ZNF568Q3ZCX4 644 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 LLGL2Q6P1M3 1020 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 TAS1R1Q7RTX1 841 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 APBB1IPQ7Z5R6 666 aaPredicted RBP13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 ZBTB33Q86T24 672 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 FAM178BQ8IXR5 827 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 CEP120Q8N960 986 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 PAAF1Q9BRP4 392 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 TCHPQ9BT92 498 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 COLEC11Q9BWP8 271 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 PARVGQ9HBI0 331 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 CACNG4Q9UBN1 327 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 STK17AQ9UEE5 414 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 CITO14578 2027 aa13.98□□□□□ -0.17
PRPF40A-203ENST00000448428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 FSD2A1L4K1 749 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 TRAK2O60296 914 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 LILRB3O75022 631 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 YEATS4O95619 227 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 BRD1O95696 1058 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 GRM5P41594 1212 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 OSTNP61366 133 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 TUSC3Q13454 348 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 PTPN14Q15678 1187 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 MPZL3Q6UWV2 235 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 SV2BQ7L1I2 683 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 DYMQ7RTS9 669 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 KCNN1Q92952 543 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 ZHX3Q9H4I2 956 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 CD320Q9NPF0 282 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 STK39Q9UEW8 545 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 FAM50BQ9Y247 325 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 VCANP13611 3396 aa13.97□□□□□ -0.17
PRPF40A-203ENST00000448428 CASTOR2A6NHX0 329 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 MYMKA6NI61 221 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 H0YCG3 227 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 TOM1L1O75674 476 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 SOD2P04179 222 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 MCF2P10911 925 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 SMAD4Q13485 552 aaKnown RBP13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 SMAD2Q15796 467 aaKnown RBP13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 ANKRD54Q6NXT1 300 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 ALKAL1Q6UXT8 129 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 ZPBP2Q6X784 338 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 CCDC73Q6ZRK6 1079 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 RNF168Q8IYW5 571 aaPredicted RBP13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 PDILTQ8N807 584 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 SMRP1Q8NCR6 262 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 DDX12PQ92771 950 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 ACAP3Q96P50 834 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 FIZ1Q96SL8 496 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 CCDC94Q9BW85 323 aaPredicted RBP13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 GPR62Q9BZJ7 368 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 HAPLN2Q9GZV7 340 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 TBX20Q9UMR3 447 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 HCFC2Q9Y5Z7 792 aa13.96□□□□□ -0.17
PRPF40A-203ENST00000448428 SPTBN5Q9NRC6 3674 aaKnown RBP13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 SMIM28A0A1B0GU29 152 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 C2CD2LO14523 706 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 CLDN3O15551 220 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 CUTAO60888 179 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 TBCAO75347 108 aaKnown RBP13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 TADA2AO75478 443 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 CNPP09543 421 aaKnown RBP13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 HARSP12081 509 aaKnown RBP13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 NMT1P30419 496 aaKnown RBP13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 STAT6P42226 847 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 YARSP54577 528 aaKnown RBP13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 HSP90AA2PQ14568 343 aaPredicted RBP13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 SEZ6Q53EL9 994 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 XKR4Q5GH76 650 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 GLRA4Q5JXX5 417 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 AXDND1Q5T1B0 1012 aaPredicted RBP13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 KIAA0319Q5VV43 1072 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 ATL3Q6DD88 541 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 FUT10Q6P4F1 479 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 SYCE2Q6PIF2 218 aa13.95□□□□□ -0.18
PRPF40A-203ENST00000448428 SHC4Q6S5L8 630 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms