RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 DNAJB4Q9UDY4 337 aa17.93■□□□□ 0.46
SF3A1-204ENST00000447376 KCNH3Q9ULD8 1083 aa17.93■□□□□ 0.46
SF3A1-204ENST00000447376 TBX20Q9UMR3 447 aa17.93■□□□□ 0.46
SF3A1-204ENST00000447376 MYMKA6NI61 221 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 POLR2DO15514 142 aaKnown RBP17.92■□□□□ 0.46
SF3A1-204ENST00000447376 DDHD2O94830 711 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 DNAJB1P25685 340 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 GRM5P41594 1212 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 HERC4Q5GLZ8 1057 aaPredicted RBP17.92■□□□□ 0.46
SF3A1-204ENST00000447376 PLPP4Q5VZY2 271 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 TAS1R3Q7RTX0 852 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 HVCN1Q96D96 273 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 ACAP3Q96P50 834 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 CDCA3Q99618 268 aaPredicted RBP17.92■□□□□ 0.46
SF3A1-204ENST00000447376 CDT1Q9H211 546 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 TLE6Q9H808 572 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 UBE2ZQ9H832 354 aaPredicted RBP17.92■□□□□ 0.46
SF3A1-204ENST00000447376 PRDM6Q9NQX0 595 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 CLDND1Q9NY35 253 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 USP25Q9UHP3 1055 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 EXOC7Q9UPT5 735 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 PLXNA4Q9HCM2 1894 aa17.92■□□□□ 0.46
SF3A1-204ENST00000447376 A0A087X0B3 334 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 NRP1O14786 923 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 EDN1P05305 212 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 NRIP1P48552 1158 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 OSTNP61366 133 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 TUSC3Q13454 348 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 ALCAMQ13740 583 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 TJAP1Q5JTD0 557 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 DDX53Q86TM3 631 aaKnown RBP17.91■□□□□ 0.46
SF3A1-204ENST00000447376 SFR1Q86XK3 245 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 COLGALT2Q8IYK4 626 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 VPS52Q8N1B4 723 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 KCNN1Q92952 543 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 PABPC5Q96DU9 382 aaKnown RBP17.91■□□□□ 0.46
SF3A1-204ENST00000447376 PANK4Q9NVE7 773 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 SSX2IPQ9Y2D8 614 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 PRG3Q9Y2Y8 225 aaPredicted RBP17.91■□□□□ 0.46
SF3A1-204ENST00000447376 PCDHB13Q9Y5F0 798 aa17.91■□□□□ 0.46
SF3A1-204ENST00000447376 TDRD15B5MCY1 1934 aaKnown RBP17.9■□□□□ 0.46
SF3A1-204ENST00000447376 NMT1P30419 496 aaKnown RBP17.9■□□□□ 0.46
SF3A1-204ENST00000447376 IRS1P35568 1242 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 AFF1P51825 1210 aaKnown RBP17.9■□□□□ 0.46
SF3A1-204ENST00000447376 ERVFC1P60507 584 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 ASIC1P78348 528 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 GTF2BQ00403 316 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 DSC1Q08554 894 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 CAMK1Q14012 370 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 RBM23Q86U06 439 aaKnown RBP17.9■□□□□ 0.46
SF3A1-204ENST00000447376 FSIP1Q8NA03 581 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 CCDC34Q96HJ3 373 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 ASB2Q96Q27 587 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 ST6GALNAC4Q9H4F1 302 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 PTPRHQ9HD43 1115 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 SLC38A7Q9NVC3 462 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 FAM50BQ9Y247 325 aa17.9■□□□□ 0.46
SF3A1-204ENST00000447376 A0A1B0GVL5 298 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 FSCN2O14926 492 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 GCNT3O95395 438 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 PFKFB1P16118 471 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 KCNA5P22460 613 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 PROZP22891 400 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 SYKP43405 635 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 NDUFV1P49821 464 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 MCL1Q07820 350 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 HYAL1Q12794 435 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 E2F4Q16254 413 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 PUS10Q3MIT2 529 aaKnown RBP17.89■□□□□ 0.45
SF3A1-204ENST00000447376 TPRNQ4KMQ1 711 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 SLFN12LQ6IEE8 588 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 KIAA1841Q6NSI8 718 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 MAP4K3Q8IVH8 894 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 DNAJC19Q96DA6 116 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 OLFML3Q9NRN5 406 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 KBTBD4Q9NVX7 518 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 MIOSQ9NXC5 875 aa17.89■□□□□ 0.45
SF3A1-204ENST00000447376 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.88■□□□□ 0.45
SF3A1-204ENST00000447376 TADA2AO75478 443 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 CXCL14O95715 111 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 PIGRP01833 764 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 URODP06132 367 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 CLTAP09496 248 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 POSTNQ15063 836 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 ZNF720Q7Z2F6 126 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 SYCP3Q8IZU3 236 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 EFHBQ8N7U6 833 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 STAMQ92783 540 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 UROC1Q96N76 676 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 ACCSQ96QU6 501 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 MSTO1Q9BUK6 570 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 TBC1D7Q9P0N9 293 aa17.88■□□□□ 0.45
SF3A1-204ENST00000447376 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.88■□□□□ 0.45
SF3A1-204ENST00000447376 EYSQ5T1H1 3165 aa17.87■□□□□ 0.45
SF3A1-204ENST00000447376 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.87■□□□□ 0.45
SF3A1-204ENST00000447376 FAM237AA0A1B0GTK4 181 aa17.87■□□□□ 0.45
SF3A1-204ENST00000447376 SOD2P04179 222 aa17.87■□□□□ 0.45
SF3A1-204ENST00000447376 SLFN14P0C7P3 912 aa17.87■□□□□ 0.45
SF3A1-204ENST00000447376 CTSAP10619 480 aa17.87■□□□□ 0.45
SF3A1-204ENST00000447376 TFF2Q03403 129 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms