RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 LIMD1Q9UGP4 676 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 USTQ9Y2C2 406 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 CASTOR2A6NHX0 329 aa20.08■□□□□ 0.81
COL9A1-205ENST00000447041 ACKR2O00590 384 aa20.08■□□□□ 0.81
COL9A1-205ENST00000447041 HSP90AA2PQ14568 343 aaPredicted RBP20.08■□□□□ 0.81
COL9A1-205ENST00000447041 PPP2R5AQ15172 486 aa20.08■□□□□ 0.81
COL9A1-205ENST00000447041 C15orf39Q6ZRI6 1047 aa20.08■□□□□ 0.81
COL9A1-205ENST00000447041 GLYCTKQ8IVS8 523 aa20.08■□□□□ 0.81
COL9A1-205ENST00000447041 E9PMD0 336 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 TUSC3Q13454 348 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 PDIA5Q14554 519 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 RABEP1Q15276 862 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 IL17AQ16552 155 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 USP41Q3LFD5 358 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 UBALD2Q8IYN6 164 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 CMASQ8NFW8 434 aaPredicted RBP20.07■□□□□ 0.8
COL9A1-205ENST00000447041 RIN2Q8WYP3 895 aaPredicted RBP20.07■□□□□ 0.8
COL9A1-205ENST00000447041 KIFAP3Q92845 792 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 IFT74Q96LB3 600 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 ADPGKQ9BRR6 497 aa20.07■□□□□ 0.8
COL9A1-205ENST00000447041 TADA2AO75478 443 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 RFPL2O75678 378 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 KIF4AO95239 1232 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 SPATA31D3P0C874 917 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 RPL17P18621 184 aaKnown RBP20.06■□□□□ 0.8
COL9A1-205ENST00000447041 CDC25AP30304 524 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 NAB2Q15742 525 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 RTP2Q5QGT7 225 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 NT5DC1Q5TFE4 455 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 SPATA31D4Q6ZUB0 917 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 PALB2Q86YC2 1186 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 PLCD3Q8N3E9 789 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 ACSF2Q96CM8 615 aaPredicted RBP20.06■□□□□ 0.8
COL9A1-205ENST00000447041 RAB34Q9BZG1 259 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.06■□□□□ 0.8
COL9A1-205ENST00000447041 GDAQ9Y2T3 454 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 MYO10Q9HD67 2058 aa20.06■□□□□ 0.8
COL9A1-205ENST00000447041 SF3B1O75533 1304 aaKnown RBP eCLIP20.05■□□□□ 0.8
COL9A1-205ENST00000447041 CCDC195A0A1B0GUA6 201 aa20.05■□□□□ 0.8
COL9A1-205ENST00000447041 TGM5O43548 720 aa20.05■□□□□ 0.8
COL9A1-205ENST00000447041 CD2BP2O95400 341 aaKnown RBP20.05■□□□□ 0.8
COL9A1-205ENST00000447041 THP07101 528 aa20.05■□□□□ 0.8
COL9A1-205ENST00000447041 ATF7IP2Q5U623 682 aa20.05■□□□□ 0.8
COL9A1-205ENST00000447041 PRSS55Q6UWB4 352 aaPredicted RBP20.05■□□□□ 0.8
COL9A1-205ENST00000447041 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.05■□□□□ 0.8
COL9A1-205ENST00000447041 FNIP2Q9P278 1114 aa20.05■□□□□ 0.8
COL9A1-205ENST00000447041 MTCL1Q9Y4B5 1905 aaKnown RBP20.05■□□□□ 0.8
COL9A1-205ENST00000447041 VWA8A3KMH1 1905 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 LAD1O00515 517 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 ST18O60284 1047 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 N4BP1O75113 896 aaKnown RBP20.04■□□□□ 0.8
COL9A1-205ENST00000447041 MRE11P49959 708 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 EFNA5P52803 228 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 TCF15Q12870 199 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 DCAF4L1Q3SXM0 396 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 GLRA4Q5JXX5 417 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 KRT79Q5XKE5 535 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 MCTP1Q6DN14 999 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 OTOP3Q7RTS5 596 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 KCNK18Q7Z418 384 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 DAW1Q8N136 415 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 ZNF707Q96C28 371 aaPredicted RBP20.04■□□□□ 0.8
COL9A1-205ENST00000447041 TMX3Q96JJ7 454 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 PHOX2BQ99453 314 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 MMTAG2Q9BU76 263 aaKnown RBP20.04■□□□□ 0.8
COL9A1-205ENST00000447041 RUSC1Q9BVN2 902 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 DPP7Q9UHL4 492 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 STK24Q9Y6E0 443 aa20.04■□□□□ 0.8
COL9A1-205ENST00000447041 CLUHO75153 1309 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 PHLPP2Q6ZVD8 1323 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 CCDC169A6NNP5 214 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 HIP1RO75146 1068 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 AVPR2P30518 371 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 PRPHP41219 470 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 NPTX2P47972 431 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 PEX3P56589 373 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 ELMSAN1Q6PJG2 1045 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 DTHD1Q6ZMT9 781 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 GPR65Q8IYL9 337 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 SMG7Q92540 1137 aaKnown RBP20.03■□□□□ 0.8
COL9A1-205ENST00000447041 WDR6Q9NNW5 1121 aaKnown RBP20.03■□□□□ 0.8
COL9A1-205ENST00000447041 DNM3Q9UQ16 869 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 KIF3AQ9Y496 699 aa20.03■□□□□ 0.8
COL9A1-205ENST00000447041 K7ERI5 159 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 IGFBP6P24592 240 aaPredicted RBP20.02■□□□□ 0.8
COL9A1-205ENST00000447041 GJB2P29033 226 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 PTPN5P54829 565 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 CREMQ03060 361 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 MAPK7Q13164 816 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 FAM171A1Q5VUB5 890 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 LILRA6Q6PI73 481 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 TAS1R3Q7RTX0 852 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 CEP57Q86XR8 500 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 CEP120Q8N960 986 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 HDAC7Q8WUI4 952 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 PRRX2Q99811 253 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 TTPALQ9BTX7 342 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 RHOBTB2Q9BYZ6 727 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 PLEKHA4Q9H4M7 779 aa20.02■□□□□ 0.8
COL9A1-205ENST00000447041 ZDBF2Q9HCK1 2354 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms