RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ZNF568Q3ZCX4 644 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 FOXD4L3Q6VB84 417 aaPredicted RBP16.2■□□□□ 0.18
USE1-202ENST00000445667 TMEM184AQ6ZMB5 413 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 MYCT1Q8N699 235 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 SMRP1Q8NCR6 262 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 LARP4BQ92615 738 aaKnown RBP16.2■□□□□ 0.18
USE1-202ENST00000445667 PAAF1Q9BRP4 392 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 TCHPQ9BT92 498 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 COLEC11Q9BWP8 271 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 PANK2Q9BZ23 570 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 LARSQ9P2J5 1176 aaKnown RBP16.2■□□□□ 0.18
USE1-202ENST00000445667 CCDC39Q9UFE4 941 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 KCNG1Q9UIX4 513 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 ODF2LQ9ULJ1 636 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 HCFC2Q9Y5Z7 792 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 IRAK3Q9Y616 596 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 ZMYM2Q9UBW7 1377 aa16.2■□□□□ 0.18
USE1-202ENST00000445667 CUL9Q8IWT3 2517 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 CASTOR2A6NHX0 329 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 C2CD2LO14523 706 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 FAM13AO94988 1023 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 SOD2P04179 222 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 THP07101 528 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 SSTR3P32745 418 aaPredicted RBP16.19■□□□□ 0.18
USE1-202ENST00000445667 TUSC3Q13454 348 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 STK38Q15208 465 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 ANKRD54Q6NXT1 300 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 SYCE2Q6PIF2 218 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 HAUS6Q7Z4H7 955 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 APBB1IPQ7Z5R6 666 aaPredicted RBP16.19■□□□□ 0.18
USE1-202ENST00000445667 GJD3Q8N144 294 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 KRI1Q8N9T8 703 aaKnown RBP16.19■□□□□ 0.18
USE1-202ENST00000445667 LINC00301Q8NCQ3 95 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 KHSRPQ92945 711 aaKnown RBP eCLIP16.19■□□□□ 0.18
USE1-202ENST00000445667 GPR62Q9BZJ7 368 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 ZHX3Q9H4I2 956 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 USP15Q9Y4E8 981 aaPredicted RBP16.19■□□□□ 0.18
USE1-202ENST00000445667 MUC3AQ02505 3323 aa16.19■□□□□ 0.18
USE1-202ENST00000445667 TDRD15B5MCY1 1934 aaKnown RBP16.19■□□□□ 0.18
USE1-202ENST00000445667 TTC28Q96AY4 2481 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 ABLIM1O14639 778 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 LILRB3O75022 631 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 EFEMP2O95967 443 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 CNPP09543 421 aaKnown RBP16.18■□□□□ 0.18
USE1-202ENST00000445667 SRGAP2BP0DMP2 458 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 ZSCAN22P10073 491 aaPredicted RBP16.18■□□□□ 0.18
USE1-202ENST00000445667 HARSP12081 509 aaKnown RBP16.18■□□□□ 0.18
USE1-202ENST00000445667 EPCAMP16422 314 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 PROZP22891 400 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 GRM5P41594 1212 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 NCKAP1LP55160 1127 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 ZP2Q05996 745 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 PKP1Q13835 747 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 NAB2Q15742 525 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 GLRA4Q5JXX5 417 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 RRAGBQ5VZM2 374 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 MPZL3Q6UWV2 235 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 DYMQ7RTS9 669 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 ADHFE1Q8IWW8 467 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 HASPINQ8TF76 798 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 CASP10Q92851 521 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 B3GALT6Q96L58 329 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 ZNF396Q96N95 335 aaPredicted RBP16.18■□□□□ 0.18
USE1-202ENST00000445667 KLHL5Q96PQ7 755 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 HERC2P3Q9BVR0 1158 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 S1PR5Q9H228 398 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 MRPL17Q9NRX2 175 aaKnown RBP16.18■□□□□ 0.18
USE1-202ENST00000445667 STK39Q9UEW8 545 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 ADAM28Q9UKQ2 775 aa16.18■□□□□ 0.18
USE1-202ENST00000445667 MORC2Q9Y6X9 1032 aaPredicted RBP16.18■□□□□ 0.18
USE1-202ENST00000445667 A0A087X0B3 334 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 SPTLC2O15270 562 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 TRAK2O60296 914 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 TADA2AO75478 443 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 F13A1P00488 732 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 MCF2P10911 925 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 KLRC2P26717 231 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 TXLNAP40222 546 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 ZNF131P52739 623 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 HSP90AA2PQ14568 343 aaPredicted RBP16.17■□□□□ 0.18
USE1-202ENST00000445667 SEZ6Q53EL9 994 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 KIAA0319Q5VV43 1072 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 FUT10Q6P4F1 479 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 RNF168Q8IYW5 571 aaPredicted RBP16.17■□□□□ 0.18
USE1-202ENST00000445667 C12orf76Q8N812 135 aaPredicted RBP16.17■□□□□ 0.18
USE1-202ENST00000445667 SLC22A17Q8WUG5 538 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 CCDC94Q9BW85 323 aaPredicted RBP16.17■□□□□ 0.18
USE1-202ENST00000445667 EMILIN2Q9BXX0 1053 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 PARVGQ9HBI0 331 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 ANKFY1Q9P2R3 1169 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 STK17AQ9UEE5 414 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 DAXXQ9UER7 740 aaPredicted RBP16.17■□□□□ 0.18
USE1-202ENST00000445667 PRKAG3Q9UGI9 489 aa16.17■□□□□ 0.18
USE1-202ENST00000445667 SMIM28A0A1B0GU29 152 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 MYMKA6NI61 221 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 H0YCG3 227 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 K7ENM7 598 aa16.16■□□□□ 0.18
USE1-202ENST00000445667 TBCAO75347 108 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms