RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 SKIP12755 728 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 PDIA2Q13087 525 aaKnown RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 ZBED8Q8IZ13 594 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 SMC1BQ8NDV3 1235 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 FAM151AQ8WW52 585 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 HEXIM2Q96MH2 286 aaKnown RBP17.69■□□□□ 0.42
TCOF1-206ENST00000445265 ZDHHC15Q96MV8 337 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 SH2D3AQ9BRG2 576 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 HAUS2Q9NVX0 235 aa17.69■□□□□ 0.42
TCOF1-206ENST00000445265 PLCB4Q15147 1175 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 LRRC55Q6ZSA7 311 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 KCNK18Q7Z418 384 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 SGSM3Q96HU1 749 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 TOPAZ1Q8N9V7 1692 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 CCT8L1PA6NM43 557 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 MYBPC2Q14324 1141 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 LONRF1Q17RB8 773 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 EIF1ADQ8N9N8 165 aaKnown RBP17.68■□□□□ 0.42
TCOF1-206ENST00000445265 GDF3Q9NR23 364 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 ASNSD1Q9NWL6 643 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 SEPT10Q9P0V9 454 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 FBXO40Q9UH90 709 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 DBR1Q9UK59 544 aaKnown RBP17.68■□□□□ 0.42
TCOF1-206ENST00000445265 AKT3Q9Y243 479 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 REXO2Q9Y3B8 237 aaKnown RBP17.68■□□□□ 0.42
TCOF1-206ENST00000445265 XPOTO43592 962 aaKnown RBP17.68■□□□□ 0.42
TCOF1-206ENST00000445265 ARL4AP40617 200 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 KLC2Q9H0B6 622 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 HOXC10Q9NYD6 342 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 A0A0G2JND7 137 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 PABPN1LA6NDY0 278 aaKnown RBP17.68■□□□□ 0.42
TCOF1-206ENST00000445265 COPEO14579 308 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 KCNJ1P48048 391 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 ARSEP51690 589 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 MYO1EQ12965 1108 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 SPP2Q13103 211 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 FOXR2Q6PJQ5 311 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 HACE1Q8IYU2 909 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 RCOR2Q8IZ40 523 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 HSPH1Q92598 858 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 FAF2Q96CS3 445 aa17.68■□□□□ 0.42
TCOF1-206ENST00000445265 SMG5Q9UPR3 1016 aaKnown RBP17.68■□□□□ 0.42
TCOF1-206ENST00000445265 GZMAP12544 262 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 ZNF720Q7Z2F6 126 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 TRPM8Q7Z2W7 1104 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 RBM15Q96T37 977 aaKnown RBP eCLIP17.67■□□□□ 0.42
TCOF1-206ENST00000445265 KCNH7Q9NS40 1196 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 ANKEF1Q9NU02 776 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 SLC9A2Q9UBY0 812 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 ZFP69BQ9UJL9 534 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
TCOF1-206ENST00000445265 RCCD1A6NED2 376 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 RNF225M0QZC1 329 aaPredicted RBP17.67■□□□□ 0.42
TCOF1-206ENST00000445265 HNRNPH1P31943 449 aaKnown RBP17.67■□□□□ 0.42
TCOF1-206ENST00000445265 ZNF677Q86XU0 584 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 TTC17Q96AE7 1141 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 NLRP4Q96MN2 994 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 TTLL3Q9Y4R7 772 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 SPEF2Q9C093 1822 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 SHMT1P34896 483 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 SH3BGRP55822 239 aaPredicted RBP17.67■□□□□ 0.42
TCOF1-206ENST00000445265 RPAINQ86UA6 219 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 GMCL1P1Q8NEA9 526 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 PSPC1Q8WXF1 523 aaKnown RBP17.67■□□□□ 0.42
TCOF1-206ENST00000445265 FAM149B1Q96BN6 582 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 CFAP36Q96G28 342 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 KRT38O76015 456 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 TNFRSF8P28908 595 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 SLC35C1Q96A29 364 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 PPCSQ9HAB8 311 aa17.67■□□□□ 0.42
TCOF1-206ENST00000445265 JPH1Q9HDC5 661 aaPredicted RBP17.67■□□□□ 0.42
TCOF1-206ENST00000445265 LMO7Q8WWI1 1683 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 ZSCAN5CA6NGD5 496 aaPredicted RBP17.66■□□□□ 0.42
TCOF1-206ENST00000445265 GOLGA8MH3BSY2 632 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 COPB2P35606 906 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 PSMC6P62333 389 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 SKOR1P84550 965 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 XKR3Q5GH77 459 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 CPA5Q8WXQ8 436 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 NGRNQ9NPE2 291 aaKnown RBP17.66■□□□□ 0.42
TCOF1-206ENST00000445265 OSGEPQ9NPF4 335 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 FGFR1OP2Q9NVK5 253 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 ZHX2Q9Y6X8 837 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 ATMINO43313 823 aaPredicted RBP17.66■□□□□ 0.42
TCOF1-206ENST00000445265 SYF2O95926 243 aaKnown RBP17.66■□□□□ 0.42
TCOF1-206ENST00000445265 ABL1P00519 1130 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 CENPCQ03188 943 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 EEPD1Q7L9B9 569 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 MAML1Q92585 1016 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 MED10Q9BTT4 135 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 MRPL4Q9BYD3 311 aaKnown RBP17.66■□□□□ 0.42
TCOF1-206ENST00000445265 OSBPL8Q9BZF1 889 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 UNC45AQ9H3U1 944 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 TMEM120BA0PK00 339 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 RAPGEF5Q92565 580 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 TMEM117Q9H0C3 514 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 TRABDQ9H4I3 376 aa17.66■□□□□ 0.42
TCOF1-206ENST00000445265 CYP26B1Q9NR63 512 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms