RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 ZBTB10Q96DT7 871 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 HAPLN2Q9GZV7 340 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 DNAJC25Q9H1X3 360 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 ZHX3Q9H4I2 956 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 AGO3Q9H9G7 860 aaKnown RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 CNTN3Q9P232 1028 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 KIAA1671Q9BY89 1806 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 KIAA0100Q14667 2235 aaKnown RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 VGLL3A8MV65 326 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 BIN1O00499 593 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 CLDN3O15551 220 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 HOXA2O43364 376 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 CYP3A5P20815 502 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 TPM4P67936 248 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 KCNA1Q09470 495 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 ARMCX5Q6P1M9 558 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 PSRC1Q6PGN9 363 aaPredicted RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 CRELD2Q6UXH1 353 aaPredicted RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 IRF2BP1Q8IU81 584 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 PGBD4Q96DM1 585 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 TARS2Q9BW92 718 aaKnown RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 AGO2Q9UKV8 859 aaKnown RBP9.56□□□□□ -0.88
FXR1-203ENST00000445140 ATP11BQ9Y2G3 1177 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 C2CD2Q9Y426 696 aa9.56□□□□□ -0.88
FXR1-203ENST00000445140 ABCB7O75027 752 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 N4BP1O75113 896 aaKnown RBP9.55□□□□□ -0.88
FXR1-203ENST00000445140 NR2F2P24468 414 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 C15orf39Q6ZRI6 1047 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 SLC24A5Q71RS6 500 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 APTXQ7Z2E3 356 aaKnown RBP9.55□□□□□ -0.88
FXR1-203ENST00000445140 SMYD4Q8IYR2 804 aaPredicted RBP9.55□□□□□ -0.88
FXR1-203ENST00000445140 SYCP3Q8IZU3 236 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 CSGALNACT2Q8N6G5 542 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 IQCDQ96DY2 449 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 IFIH1Q9BYX4 1025 aaKnown RBP9.55□□□□□ -0.88
FXR1-203ENST00000445140 TMEM161AQ9NX61 479 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 TSC2P49815 1807 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 EPB41P11171 864 aaKnown RBP9.55□□□□□ -0.88
FXR1-203ENST00000445140 CYP24A1Q07973 514 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 ZNF568Q3ZCX4 644 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 NPAS4Q8IUM7 802 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 TNS4Q8IZW8 715 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 LINC01599Q8WXQ3 324 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 HERVK_113Q902F9 699 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 SNX27Q96L92 541 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 SCLT1Q96NL6 688 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 FRMD4BQ9Y2L6 1034 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 COQ4Q9Y3A0 265 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 NFE2L3Q9Y4A8 694 aa9.55□□□□□ -0.88
FXR1-203ENST00000445140 TTC26A0AVF1 554 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 B4GALT5O43286 388 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 FAM163BP0C2L3 166 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 ADAM9Q13443 819 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 EEF1DP3Q658K8 133 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 ECHDC2Q86YB7 292 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 WDR49Q8IV35 697 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 SMG8Q8ND04 991 aaKnown RBP9.54□□□□□ -0.88
FXR1-203ENST00000445140 SPATA18Q8TC71 538 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 ZNF830Q96NB3 372 aaPredicted RBP9.54□□□□□ -0.88
FXR1-203ENST00000445140 CGRRF1Q99675 332 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 CBWD1Q9BRT8 395 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 MSTO1Q9BUK6 570 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 CCDC94Q9BW85 323 aaPredicted RBP9.54□□□□□ -0.88
FXR1-203ENST00000445140 VRTNQ9H8Y1 702 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 RC3H2Q9HBD1 1191 aaKnown RBP9.54□□□□□ -0.88
FXR1-203ENST00000445140 FAM105AQ9NUU6 356 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 ZNF233A6NK53 670 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 ACTN1P12814 892 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 ZSCAN20P17040 1043 aaPredicted RBP9.54□□□□□ -0.88
FXR1-203ENST00000445140 CD52P31358 61 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 BMP8BP34820 402 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 ZBTB6Q15916 424 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 SNRNP35Q16560 246 aaKnown RBP9.54□□□□□ -0.88
FXR1-203ENST00000445140 MAN2A1Q16706 1144 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 TCP11X2Q5H9J9 407 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 POMGNT1Q8WZA1 660 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 TOPORSQ9NS56 1045 aaPredicted RBP9.54□□□□□ -0.88
FXR1-203ENST00000445140 TRIP11Q15643 1979 aa9.54□□□□□ -0.88
FXR1-203ENST00000445140 TTLL13PA6NNM8 815 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 AKAP3O75969 853 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 GHRP10912 638 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 ATF7P17544 494 aaPredicted RBP9.53□□□□□ -0.88
FXR1-203ENST00000445140 ATN1P54259 1190 aaPredicted RBP9.53□□□□□ -0.88
FXR1-203ENST00000445140 FPGSQ05932 587 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 BFSP1Q12934 665 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 NELFCDQ8IXH7 590 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 FAM186BQ8IYM0 893 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 BICD1Q96G01 975 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 FBXL5Q9UKA1 691 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 PIN4Q9Y237 131 aaKnown RBP9.53□□□□□ -0.88
FXR1-203ENST00000445140 IPPQ9Y573 584 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 TET1Q8NFU7 2136 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 CEP350Q5VT06 3117 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 A0A1B0GTH6 734 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 A0A1W2PQC6 194 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 TRIM49BA6NDI0 452 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 TMEM189-UBE2V1I3L0A0 370 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 MGEA5O60502 916 aa9.53□□□□□ -0.88
FXR1-203ENST00000445140 ZC3H11AO75152 810 aaKnown RBP eCLIP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms